RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 GCNT3O95395 438 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 OLFM2O95897 454 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 ABL1P00519 1130 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 OAS1P00973 400 aaKnown RBP9.7□□□□□ -0.86
SYNE2-209ENST00000553308 PDGFRBP09619 1106 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 PFKLP17858 780 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 ANXA13P27216 316 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 GJB2P29033 226 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 EIF2DP41214 584 aaKnown RBP9.7□□□□□ -0.86
SYNE2-209ENST00000553308 FAM193AP78312 1265 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 RBP5P82980 135 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 CYP27A1Q02318 531 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 SEMA3BQ13214 749 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 HSF5Q4G112 596 aaPredicted RBP9.7□□□□□ -0.86
SYNE2-209ENST00000553308 EOGTQ5NDL2 527 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 PEAR1Q5VY43 1037 aaPredicted RBP9.7□□□□□ -0.86
SYNE2-209ENST00000553308 RHBDF2Q6PJF5 856 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 VSTM1Q6UX27 236 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 LIMS2Q7Z4I7 341 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 PGBD3Q8N328 593 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 PHTF2Q8N3S3 785 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 DEFB119Q8N690 84 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 OR5B17Q8NGF7 314 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 OR2I1PQ8NGU4 316 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 PCED1BQ96HM7 432 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 EPSTI1Q96J88 318 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 ACCSQ96QU6 501 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 TTLL2Q9BWV7 592 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 GTPBP2Q9BX10 602 aaKnown RBP9.7□□□□□ -0.86
SYNE2-209ENST00000553308 PCIF1Q9H4Z3 704 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 ARHGEF4Q9NR80 690 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 TMEM30AQ9NV96 361 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 CFAP97Q9P2B7 532 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 SEL1LQ9UBV2 794 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 CDH9Q9ULB4 789 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 NME7Q9Y5B8 376 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 PCDH15Q96QU1 1955 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 ATRXP46100 2492 aa9.7□□□□□ -0.86
SYNE2-209ENST00000553308 F8VP50 259 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 TAF4O00268 1085 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 SLC9A3R1O14745 358 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-209ENST00000553308 ADH1CP00326 375 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 LDHAP00338 332 aaKnown RBP9.69□□□□□ -0.86
SYNE2-209ENST00000553308 MBL2P11226 248 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-209ENST00000553308 ADH5P11766 374 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 GARTP22102 1010 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 GRIA2P42262 883 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 ATXN3P54252 364 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-209ENST00000553308 CACNA2D1P54289 1103 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 RPL6Q02878 288 aaKnown RBP9.69□□□□□ -0.86
SYNE2-209ENST00000553308 IFRD2Q12894 506 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-209ENST00000553308 TAF10Q12962 218 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 MYO1EQ12965 1108 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 SF3A1Q15459 793 aaKnown RBP9.69□□□□□ -0.86
SYNE2-209ENST00000553308 MDH1BQ5I0G3 518 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 LY6G5CQ5SRR4 150 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 SYCP3Q8IZU3 236 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 CHCHD4Q8N4Q1 142 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 DNAJC19Q96DA6 116 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 HPDLQ96IR7 371 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 ANKRD36BP1Q96IX9 119 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 INTS13Q9NVM9 706 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 STK17AQ9UEE5 414 aa9.69□□□□□ -0.86
SYNE2-209ENST00000553308 MYOFQ9NZM1 2061 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 ZZEF1O43149 2961 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 AKAP13Q12802 2813 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 A0A0A0MRY4 1105 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 UPK3BL1B0FP48 263 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 UPK3BL2E5RIL1 263 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 TRIM66O15016 1216 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 AP5Z1O43299 807 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 CD2BP2O95400 341 aaKnown RBP9.68□□□□□ -0.86
SYNE2-209ENST00000553308 BMP15O95972 392 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 SERPINF2P08697 491 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 IDEP14735 1019 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 GAP43P17677 238 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 GABRG2P18507 467 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 WARSP23381 471 aaKnown RBP9.68□□□□□ -0.86
SYNE2-209ENST00000553308 HOXD12P35452 270 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 DPP6P42658 865 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 TNFRSF4P43489 277 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 NOP14P78316 857 aaKnown RBP9.68□□□□□ -0.86
SYNE2-209ENST00000553308 GFPT1Q06210 699 aaPredicted RBP9.68□□□□□ -0.86
SYNE2-209ENST00000553308 MAPRE1Q15691 268 aaKnown RBP9.68□□□□□ -0.86
SYNE2-209ENST00000553308 DUOXA1Q1HG43 343 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 SPDYCQ5MJ68 293 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 DPH6Q7L8W6 267 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 HS2ST1Q7LGA3 356 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 GPD1LQ8N335 351 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 HDDC3Q8N4P3 179 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 MINDY1Q8N5J2 469 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 ZNF513Q8N8E2 541 aaPredicted RBP9.68□□□□□ -0.86
SYNE2-209ENST00000553308 KIAA1958Q8N8K9 716 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 NAT16Q8N8M0 369 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 MYCBPAPQ8TBZ2 947 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 ERLEC1Q96DZ1 483 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 TMX3Q96JJ7 454 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 ZFRQ96KR1 1074 aaKnown RBP9.68□□□□□ -0.86
SYNE2-209ENST00000553308 C8orf48Q96LL4 319 aa9.68□□□□□ -0.86
SYNE2-209ENST00000553308 CEP295NLQ96MC4 621 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms