RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 F11P03951 625 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 SRFP11831 508 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 CCDC130P13994 396 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 TCF3P15923 654 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 PSMC3P17980 439 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 SLC9A1P19634 815 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 ACO1P21399 889 aaKnown RBP10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 ADORA2BP29275 332 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 PLA2G4AP47712 749 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 ZNF132P52740 706 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 SLC5A3P53794 718 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 MAP3K7CLP57077 242 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 SIGLEC14Q08ET2 396 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 NR1H3Q13133 447 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 HTR4Q13639 388 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 RAPGEF1Q13905 1077 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 NCAPHQ15003 741 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 IQCB1Q15051 598 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 ARHGAP44Q17R89 818 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 TSR1Q2NL82 804 aaKnown RBP10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 PPP1R26Q5T8A7 1209 aaPredicted RBP10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 TRIM72Q6ZMU5 477 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 CLEC20AQ6ZU45 233 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 GAREM2Q75VX8 874 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 CCDC186Q7Z3E2 898 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 ZDHHC17Q8IUH5 632 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 MFSD6LQ8IWD5 586 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 DHX40Q8IX18 779 aaKnown RBP10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 FAM71AQ8IYT1 594 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 TMEM130Q8N3G9 435 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 UBR7Q8N806 425 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 ITFG1Q8TB96 612 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 SHKBP1Q8TBC3 707 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 ZSCAN18Q8TBC5 510 aaPredicted RBP10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 IRGQQ8WZA9 623 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 EDAQ92838 391 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 DNASE1L2Q92874 299 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 OTUB2Q96DC9 234 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 MCRS1Q96EZ8 462 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 MYADMQ96S97 322 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 NELL2Q99435 816 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 ARID3AQ99856 593 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 LPIN3Q9BQK8 851 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 TRMT61BQ9BVS5 477 aaKnown RBP10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 LSM14BQ9BX40 385 aaKnown RBP10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 LHX5Q9H2C1 402 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 CBX8Q9HC52 389 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.83□□□□□ -0.681e-6■■■■■ 78.6
TRAFD1-208ENST00000552890 SLC2A4RGQ9NR83 387 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 TDP1Q9NUW8 608 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 HCFC1R1Q9NWW0 138 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 WNT16Q9UBV4 365 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 TSPAN16Q9UKR8 245 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 STRIP2Q9ULQ0 834 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 ZNF510Q9Y2H8 683 aa10.83□□□□□ -0.68
TRAFD1-208ENST00000552890 ZNF840PA6NDX5 716 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 DLL1O00548 723 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 MAN2B1O00754 1011 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 TNFRSF10BO14763 440 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 CHADO15335 359 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 THAP12O43422 761 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 ZBED1O96006 694 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 CKMP06732 381 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 DESP17661 470 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 HDCP19113 662 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 ATP5C1P36542 298 aaKnown RBP10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 KIF11P52732 1056 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 NUBP1P53384 320 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 UBASH3AP57075 661 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 ZNF445P59923 1031 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 COG7P83436 770 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 TAF10Q12962 218 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 TRIM14Q14142 442 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 PDGFRLQ15198 375 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 E2F5Q15329 346 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 TEAD2Q15562 447 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 GOLGA7BQ2TAP0 167 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 HSP90AA4PQ58FG1 418 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 FIGNQ5HY92 759 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 PAQR9Q6ZVX9 377 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 VPS36Q86VN1 386 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 ARID3BQ8IVW6 561 aaPredicted RBP10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 TTC9BQ8N6N2 239 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 TMEM35BQ8NCS4 154 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 CSGALNACT1Q8TDX6 532 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 ZNF606Q8WXB4 792 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 KREMEN1Q96MU8 473 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 SMOQ99835 787 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 COL25A1Q9BXS0 654 aaPredicted RBP10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 RTN4Q9NQC3 1192 aaKnown RBP10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 TBC1D14Q9P2M4 693 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 FBXL21Q9UKT6 434 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 PCDHGC3Q9UN70 934 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 DUSP12Q9UNI6 340 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 BZW2Q9Y6E2 419 aaKnown RBP10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 A0A0C4DFX4 3053 aa10.82□□□□□ -0.68
TRAFD1-208ENST00000552890 DENND4AQ7Z401 1863 aa10.81□□□□□ -0.68
TRAFD1-208ENST00000552890 A0A1B0GTH6 734 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms