RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 HOXD12P35452 270 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 GRIA2P42262 883 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 TNFRSF4P43489 277 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 PPP3CCP48454 512 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 RESTQ13127 1097 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 MAPRE1Q15691 268 aaKnown RBP18.05■□□□□ 0.48
CACNB3-222ENST00000552465 PGBD3Q8N328 593 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 KBTBD7Q8WVZ9 684 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 MTMR12Q9C0I1 747 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 SMPD4Q9NXE4 827 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 EHD2Q9NZN4 543 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 TBC1D7Q9P0N9 293 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 SEL1LQ9UBV2 794 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 SLC6A14Q9UN76 642 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 CPQQ9Y646 472 aa18.05■□□□□ 0.48
CACNB3-222ENST00000552465 TCRBV21S2A2A0A5A6 115 aa18.04■□□□□ 0.48
CACNB3-222ENST00000552465 FAM221BA6H8Z2 402 aa18.04■□□□□ 0.48
CACNB3-222ENST00000552465 SCAMP3O14828 347 aaKnown RBP18.04■□□□□ 0.48
CACNB3-222ENST00000552465 BMP15O95972 392 aa18.04■□□□□ 0.48
CACNB3-222ENST00000552465 CFIP05156 583 aa18.04■□□□□ 0.48
CACNB3-222ENST00000552465 CYP27A1Q02318 531 aa18.04■□□□□ 0.48
CACNB3-222ENST00000552465 MYO1EQ12965 1108 aa18.04■□□□□ 0.48
CACNB3-222ENST00000552465 DUOXA1Q1HG43 343 aa18.04■□□□□ 0.48
CACNB3-222ENST00000552465 HDDC3Q8N4P3 179 aa18.04■□□□□ 0.48
CACNB3-222ENST00000552465 CEP76Q8TAP6 659 aa18.04■□□□□ 0.48
CACNB3-222ENST00000552465 HPDLQ96IR7 371 aa18.04■□□□□ 0.48
CACNB3-222ENST00000552465 ZDHHC4Q9NPG8 344 aa18.04■□□□□ 0.48
CACNB3-222ENST00000552465 FSCN3Q9NQT6 498 aa18.04■□□□□ 0.48
CACNB3-222ENST00000552465 ARHGEF4Q9NR80 690 aa18.04■□□□□ 0.48
CACNB3-222ENST00000552465 CFAP97Q9P2B7 532 aa18.04■□□□□ 0.48
CACNB3-222ENST00000552465 H0Y626 953 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 TAF4O00268 1085 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 TRIM66O15016 1216 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 TRIM16O95361 564 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 ADH1CP00326 375 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 ABL1P00519 1130 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 OAS1P00973 400 aaKnown RBP18.03■□□□□ 0.48
CACNB3-222ENST00000552465 SERPINF2P08697 491 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 PDGFRBP09619 1106 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 TMEM191BP0C7N4 346 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 ADH5P11766 374 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 GAP43P17677 238 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 GJB2P29033 226 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 RDXP35241 583 aaKnown RBP18.03■□□□□ 0.48
CACNB3-222ENST00000552465 ATXN3P54252 364 aaPredicted RBP18.03■□□□□ 0.48
CACNB3-222ENST00000552465 FAM193AP78312 1265 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 NOP14P78316 857 aaKnown RBP18.03■□□□□ 0.48
CACNB3-222ENST00000552465 KDSRQ06136 332 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 GFPT1Q06210 699 aaPredicted RBP18.03■□□□□ 0.48
CACNB3-222ENST00000552465 SYCP3Q8IZU3 236 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 PHTF2Q8N3S3 785 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 CHCHD4Q8N4Q1 142 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 MYCBPAPQ8TBZ2 947 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 PCED1BQ96HM7 432 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 EPSTI1Q96J88 318 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 CBWD1Q9BRT8 395 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 GTPBP2Q9BX10 602 aaKnown RBP18.03■□□□□ 0.48
CACNB3-222ENST00000552465 INTS13Q9NVM9 706 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 R3HCC1Q9Y3T6 440 aaKnown RBP18.03■□□□□ 0.48
CACNB3-222ENST00000552465 PCDHB13Q9Y5F0 798 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 LAMA1P25391 3075 aa18.03■□□□□ 0.48
CACNB3-222ENST00000552465 ASCC3Q8N3C0 2202 aaKnown RBP18.03■□□□□ 0.48
CACNB3-222ENST00000552465 ANAPC1Q9H1A4 1944 aa18.02■□□□□ 0.48
CACNB3-222ENST00000552465 ZFYVE26Q68DK2 2539 aa18.02■□□□□ 0.48
CACNB3-222ENST00000552465 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.02■□□□□ 0.48
CACNB3-222ENST00000552465 AP5Z1O43299 807 aa18.02■□□□□ 0.48
CACNB3-222ENST00000552465 GCNT3O95395 438 aa18.02■□□□□ 0.48
CACNB3-222ENST00000552465 CAPNS1P04632 268 aa18.02■□□□□ 0.48
CACNB3-222ENST00000552465 WARSP23381 471 aaKnown RBP18.02■□□□□ 0.48
CACNB3-222ENST00000552465 TAF10Q12962 218 aa18.02■□□□□ 0.48
CACNB3-222ENST00000552465 USP49Q70CQ1 688 aa18.02■□□□□ 0.48
CACNB3-222ENST00000552465 DDX42Q86XP3 938 aaKnown RBP eCLIP18.02■□□□□ 0.48
CACNB3-222ENST00000552465 DEFB119Q8N690 84 aa18.02■□□□□ 0.48
CACNB3-222ENST00000552465 KCNV2Q8TDN2 545 aa18.02■□□□□ 0.48
CACNB3-222ENST00000552465 NOC3LQ8WTT2 800 aaKnown RBP18.02■□□□□ 0.48
CACNB3-222ENST00000552465 DNAJC19Q96DA6 116 aa18.02■□□□□ 0.48
CACNB3-222ENST00000552465 ANKRD36BP1Q96IX9 119 aa18.02■□□□□ 0.48
CACNB3-222ENST00000552465 C8orf48Q96LL4 319 aa18.02■□□□□ 0.48
CACNB3-222ENST00000552465 PCIF1Q9H4Z3 704 aa18.02■□□□□ 0.48
CACNB3-222ENST00000552465 CAPN10Q9HC96 672 aa18.02■□□□□ 0.48
CACNB3-222ENST00000552465 TBC1D14Q9P2M4 693 aa18.02■□□□□ 0.48
CACNB3-222ENST00000552465 ZZEF1O43149 2961 aa18.01■□□□□ 0.47
CACNB3-222ENST00000552465 F8VP50 259 aa18.01■□□□□ 0.47
CACNB3-222ENST00000552465 OPHN1O60890 802 aa18.01■□□□□ 0.47
CACNB3-222ENST00000552465 MBL2P11226 248 aaPredicted RBP18.01■□□□□ 0.47
CACNB3-222ENST00000552465 CASP5P51878 434 aa18.01■□□□□ 0.47
CACNB3-222ENST00000552465 RPL6Q02878 288 aaKnown RBP18.01■□□□□ 0.47
CACNB3-222ENST00000552465 GAD2Q05329 585 aa18.01■□□□□ 0.47
CACNB3-222ENST00000552465 SF3A1Q15459 793 aaKnown RBP18.01■□□□□ 0.47
CACNB3-222ENST00000552465 LY6G5CQ5SRR4 150 aa18.01■□□□□ 0.47
CACNB3-222ENST00000552465 TDRD10Q5VZ19 366 aaKnown RBP18.01■□□□□ 0.47
CACNB3-222ENST00000552465 SLC36A4Q6YBV0 504 aa18.01■□□□□ 0.47
CACNB3-222ENST00000552465 OR5B17Q8NGF7 314 aa18.01■□□□□ 0.47
CACNB3-222ENST00000552465 OLFML3Q9NRN5 406 aa18.01■□□□□ 0.47
CACNB3-222ENST00000552465 STK17AQ9UEE5 414 aa18.01■□□□□ 0.47
CACNB3-222ENST00000552465 PTPRDP23468 1912 aa18.01■□□□□ 0.47
CACNB3-222ENST00000552465 PTPRJQ12913 1337 aa18■□□□□ 0.47
CACNB3-222ENST00000552465 E2F8A0AVK6 867 aa18■□□□□ 0.47
CACNB3-222ENST00000552465 TBC1D3BA6NDS4 549 aa18■□□□□ 0.47
CACNB3-222ENST00000552465 PCNX2A6NKB5 2137 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms