RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 PDZD8Q8NEN9 1154 aa17.17■□□□□ 0.34
CALCOCO1-220ENST00000552282 SYAP1Q96A49 352 aaPredicted RBP17.17■□□□□ 0.34
CALCOCO1-220ENST00000552282 OTUB2Q96DC9 234 aa17.17■□□□□ 0.34
CALCOCO1-220ENST00000552282 CNOT6LQ96LI5 555 aaKnown RBP17.17■□□□□ 0.34
CALCOCO1-220ENST00000552282 FNBP1Q96RU3 617 aa17.17■□□□□ 0.34
CALCOCO1-220ENST00000552282 MMS19Q96T76 1030 aa17.17■□□□□ 0.34
CALCOCO1-220ENST00000552282 LINC00597Q9H2U6 94 aa17.17■□□□□ 0.34
CALCOCO1-220ENST00000552282 MMP17Q9ULZ9 603 aa17.17■□□□□ 0.34
CALCOCO1-220ENST00000552282 BCLAF3A2AJT9 711 aaKnown RBP17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 RHOBTB1O94844 696 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 PDGFRBP09619 1106 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 DLATP10515 647 aaKnown RBP17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 PTPN1P18031 435 aaKnown RBP17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 TNNI1P19237 187 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 AP3M2P53677 418 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 CACNA2D1P54289 1103 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 TNNC1P63316 161 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 CYP27A1Q02318 531 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 WDR72Q3MJ13 1102 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 MDH1BQ5I0G3 518 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 PMS2CLQ68D20 193 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 ATL3Q6DD88 541 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 IL31Q6EBC2 164 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 B3GALNT2Q8NCR0 500 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 OLIG1Q8TAK6 271 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 GOLGA5Q8TBA6 731 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 NOC3LQ8WTT2 800 aaKnown RBP17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 ZNF516Q92618 1163 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 DHX58Q96C10 678 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 SLITRK1Q96PX8 696 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 RNF38Q9H0F5 515 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 SNX25Q9H3E2 840 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 RXFP3Q9NSD7 469 aa17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 TNRC6BQ9UPQ9 1833 aaKnown RBP17.16■□□□□ 0.34
CALCOCO1-220ENST00000552282 RTN3O95197 1032 aaPredicted RBP17.15■□□□□ 0.34
CALCOCO1-220ENST00000552282 TAF10Q12962 218 aa17.15■□□□□ 0.34
CALCOCO1-220ENST00000552282 STPG1Q5TH74 334 aa17.15■□□□□ 0.34
CALCOCO1-220ENST00000552282 SLC9A9Q8IVB4 645 aa17.15■□□□□ 0.34
CALCOCO1-220ENST00000552282 SNX21Q969T3 373 aa17.15■□□□□ 0.34
CALCOCO1-220ENST00000552282 ZFRQ96KR1 1074 aaKnown RBP17.15■□□□□ 0.34
CALCOCO1-220ENST00000552282 LSM14BQ9BX40 385 aaKnown RBP17.15■□□□□ 0.34
CALCOCO1-220ENST00000552282 BACH2Q9BYV9 841 aa17.15■□□□□ 0.34
CALCOCO1-220ENST00000552282 ZNF518BQ9C0D4 1074 aa17.15■□□□□ 0.34
CALCOCO1-220ENST00000552282 POLR3BQ9NW08 1133 aaPredicted RBP17.15■□□□□ 0.34
CALCOCO1-220ENST00000552282 COMMD8Q9NX08 183 aa17.15■□□□□ 0.34
CALCOCO1-220ENST00000552282 CPQQ9Y646 472 aa17.15■□□□□ 0.34
CALCOCO1-220ENST00000552282 CFAP47Q6ZTR5 3102 aa17.15■□□□□ 0.34
CALCOCO1-220ENST00000552282 FRYQ5TBA9 3013 aa17.15■□□□□ 0.34
CALCOCO1-220ENST00000552282 E2F8A0AVK6 867 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 TNFRSF10BO14763 440 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 ZDHHC11BP0C7U3 371 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 DGKEP52429 567 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 MYL6P60660 151 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 DHCR24Q15392 516 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 CRY1Q16526 586 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 KNOP1Q1ED39 458 aaKnown RBP17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 TDRD10Q5VZ19 366 aaKnown RBP17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 FILIP1Q7Z7B0 1213 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 NUP93Q8N1F7 819 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 PHTF2Q8N3S3 785 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 TSTD1Q8NFU3 115 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 OR6B3Q8NGW1 331 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 PLEKHO2Q8TD55 490 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 PARD3BQ8TEW8 1205 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 B3GNT5Q9BYG0 378 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 DPEP3Q9H4B8 488 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 DMAC2Q9NW81 257 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 TBC1D14Q9P2M4 693 aa17.14■□□□□ 0.33
CALCOCO1-220ENST00000552282 CHD6Q8TD26 2715 aa17.13■□□□□ 0.33
CALCOCO1-220ENST00000552282 A8MXQ7 604 aa17.13■□□□□ 0.33
CALCOCO1-220ENST00000552282 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.13■□□□□ 0.33
CALCOCO1-220ENST00000552282 KIR2DL1P43626 348 aaPredicted RBP17.13■□□□□ 0.33
CALCOCO1-220ENST00000552282 CYP2J2P51589 502 aa17.13■□□□□ 0.33
CALCOCO1-220ENST00000552282 RESP18Q5W5W9 173 aa17.13■□□□□ 0.33
CALCOCO1-220ENST00000552282 FAM35AQ86V20 835 aa17.13■□□□□ 0.33
CALCOCO1-220ENST00000552282 ETFBKMTQ8IXQ9 262 aa17.13■□□□□ 0.33
CALCOCO1-220ENST00000552282 ABCA7Q8IZY2 2146 aa17.13■□□□□ 0.33
CALCOCO1-220ENST00000552282 KCNV2Q8TDN2 545 aa17.13■□□□□ 0.33
CALCOCO1-220ENST00000552282 CCDC127Q96BQ5 260 aa17.13■□□□□ 0.33
CALCOCO1-220ENST00000552282 TFIP11Q9UBB9 837 aaKnown RBP17.13■□□□□ 0.33
CALCOCO1-220ENST00000552282 ATP8B3O60423 1300 aa17.13■□□□□ 0.33
CALCOCO1-220ENST00000552282 THADAQ6YHU6 1953 aa17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 CLIC2O15247 247 aa17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 POLR2DO15514 142 aaKnown RBP17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 HOXC11O43248 304 aaPredicted RBP17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 ADH1CP00326 375 aa17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 C4BPAP04003 597 aaKnown RBP17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 YWHAQP27348 245 aa17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 TRPC3Q13507 836 aa17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 USP39Q53GS9 565 aaKnown RBP17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 SPDYCQ5MJ68 293 aa17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 RHBDF2Q6PJF5 856 aa17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 PAQR9Q6ZVX9 377 aa17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 NELFCDQ8IXH7 590 aa17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 RDH13Q8NBN7 331 aa17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 MDGA1Q8NFP4 955 aa17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 TNIP3Q96KP6 325 aa17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 PNKPQ96T60 521 aa17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 CSNK1G1Q9HCP0 422 aa17.12■□□□□ 0.33
CALCOCO1-220ENST00000552282 DMAP1Q9NPF5 467 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 167.4 ms