RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 NDUFAB1O14561 156 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 NDC80O14777 642 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 PAPSS1O43252 624 aaPredicted RBP14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 PRPSAP2O60256 369 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 TCEA3O75764 348 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 APOC2P02655 101 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 LMO2P25791 158 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 MMP13P45452 471 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 GJA9P57773 515 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 MORF4L2Q15014 288 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 ZDHHC17Q8IUH5 632 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 APPL2Q8NEU8 664 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 CFAP57Q96MR6 1250 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 RBM15Q96T37 977 aaKnown RBP eCLIP14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 MTG1Q9BT17 334 aaPredicted RBP14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 CALN1Q9BXU9 219 aa14.68□□□□□ -0.06
RAB3IP-216ENST00000552199 IFNB1P01574 187 aa14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 MAGEA4P43358 317 aa14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 SEC24CP53992 1094 aa14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 BCAT1P54687 386 aa14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 CDH6P55285 790 aa14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 MRPS6P82932 125 aaKnown RBP14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 PPARDQ03181 441 aa14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 BST2Q10589 180 aaKnown RBP14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 SREBF2Q12772 1141 aa14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 CDO1Q16878 200 aa14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 LONRF1Q17RB8 773 aa14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 GNASQ5JWF2 1037 aa14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 ZNF618Q5T7W0 954 aa14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 RNASEH2BQ5TBB1 312 aaKnown RBP14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 TWF2Q6IBS0 349 aaKnown RBP14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 NLRP14Q86W24 1093 aa14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 CENPTQ96BT3 561 aa14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 MAK16Q9BXY0 300 aaKnown RBP14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 DNAI2Q9GZS0 605 aa14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 PPANQ9NQ55 473 aaKnown RBP14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.67□□□□□ -0.06
RAB3IP-216ENST00000552199 DCAF8L1A6NGE4 600 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 E7EVH7 732 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 HUS1O60921 280 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 CYBAP13498 195 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 CCDC130P13994 396 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 PECAM1P16284 738 aaPredicted RBP14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 ADORA2BP29275 332 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 LRPAP1P30533 357 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 SDC4P31431 198 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 RPL34P49207 117 aaKnown RBP14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 LILRA4P59901 499 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 ATP11AP98196 1134 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 MMRN1Q13201 1228 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 DPYSL3Q14195 570 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 CCDC142Q17RM4 750 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 NBPF20Q3BBV1 942 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 BOLA3Q53S33 107 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 MDM1Q8TC05 714 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 C9orf72Q96LT7 481 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 CCT8L2Q96SF2 557 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 NCAPGQ9BPX3 1015 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 B3GNT5Q9BYG0 378 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 C10orf88Q9H8K7 445 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 CYLDQ9NQC7 956 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 GTF2IRD1Q9UHL9 959 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 SHOC2Q9UQ13 582 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 TRPV2Q9Y5S1 764 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 CDY2AQ9Y6F7 541 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 SCN10AQ9Y5Y9 1956 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 GMNCA6NCL1 334 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 M0QZ92 97 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 PTGESO14684 152 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 TRAPPC3O43617 180 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 WARSP23381 471 aaKnown RBP14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 GDF10P55107 478 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 EIF3EP60228 445 aaKnown RBP14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 PDK2Q15119 407 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 FAM47CQ5HY64 1035 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 MFSD14CQ5VZR4 134 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 PCGF5Q86SE9 256 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 ADGRF2Q8IZF7 708 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 MYCBPAPQ8TBZ2 947 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 FAM172AQ8WUF8 416 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 TEKT4Q8WW24 435 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 RSAD2Q8WXG1 361 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 PPP1R10Q96QC0 940 aaKnown RBP14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 UPF3AQ9H1J1 476 aaKnown RBP14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 SAYSD1Q9NPB0 183 aa14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 NGRNQ9NPE2 291 aaKnown RBP14.66□□□□□ -0.06
RAB3IP-216ENST00000552199 EBAG9O00559 213 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 MCF2LO15068 1137 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 FAM107AO95990 144 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 ABHD2P08910 425 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 DESP17661 470 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 RPL22P35268 128 aaKnown RBP14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 SCNN1AP37088 669 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 ACADSBP45954 432 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 TM4SF4P48230 202 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 TFDP2Q14188 446 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 KRT81Q14533 505 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 GDF6Q6KF10 455 aaPredicted RBP14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 SCYL2Q6P3W7 929 aa14.65□□□□□ -0.06
RAB3IP-216ENST00000552199 CXCL17Q6UXB2 119 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms