RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 RIN3Q8TB24 985 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 MDM1Q8TC05 714 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 RLN3Q8WXF3 142 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 GCNAQ96QF7 691 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 NAP1L4Q99733 375 aaKnown RBP5.84□□□□□ -1.47
HOXB3-213ENST00000552000 LPIN3Q9BQK8 851 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 GTPBP2Q9BX10 602 aaKnown RBP5.84□□□□□ -1.47
HOXB3-213ENST00000552000 SLC46A2Q9BY10 475 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 CDT1Q9H211 546 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 FSCN3Q9NQT6 498 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 TMEM74BQ9NUR3 256 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 MARK1Q9P0L2 795 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 MBD1Q9UIS9 605 aaPredicted RBP5.84□□□□□ -1.47
HOXB3-213ENST00000552000 PCDHA12Q9UN75 941 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 TNFSF13BQ9Y275 285 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 ASB3Q9Y575 518 aa5.84□□□□□ -1.47
HOXB3-213ENST00000552000 PCDH15Q96QU1 1955 aa5.84□□□□□ -1.48
HOXB3-213ENST00000552000 ANTXRLA6NF34 631 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 OR6C75A6NL08 312 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 UPK3BL1B0FP48 263 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 C9orf172C9J069 976 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 UPK3BL2E5RIL1 263 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 M0QZQ0 153 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 TNFRSF10BO14763 440 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 OPHN1O60890 802 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 DTNBO60941 627 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 LARGE1O95461 756 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 FAM157BP0CG42 384 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 XRCC6P12956 609 aaKnown RBP eCLIP5.83□□□□□ -1.488e-6■■□□□ 12.6
HOXB3-213ENST00000552000 CYP11B2P19099 503 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 RPS6KB1P23443 525 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 CDC25CP30307 473 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 HSPA4P34932 840 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 GJA4P35212 333 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 AVPR1AP37288 418 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 TXKP42681 527 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 PTGER3P43115 390 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 EFNA5P52803 228 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 ATXN3P54252 364 aaPredicted RBP5.83□□□□□ -1.48
HOXB3-213ENST00000552000 SEC13P55735 322 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 C19orf57Q0VDD7 668 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 BFSP1Q12934 665 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 VEPH1Q14D04 833 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 PPP2R5AQ15172 486 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 CALCRLQ16602 461 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 C2orf27AQ580R0 203 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 CC2D1AQ6P1N0 951 aaPredicted RBP5.83□□□□□ -1.48
HOXB3-213ENST00000552000 LPCAT2Q7L5N7 544 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 USP37Q86T82 979 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 ITIH5Q86UX2 942 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 SYT12Q8IV01 421 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 CMTM8Q8IZV2 173 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 FAM177A1Q8N128 213 aaPredicted RBP5.83□□□□□ -1.48
HOXB3-213ENST00000552000 CPA6Q8N4T0 437 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 CCDC33Q8N5R6 958 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 PNPLA1Q8N8W4 532 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 MAB21L3Q8N8X9 362 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 TTC16Q8NEE8 873 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 MDGA1Q8NFP4 955 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 GIPC2Q8TF65 315 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 USP13Q92995 863 aaPredicted RBP5.83□□□□□ -1.48
HOXB3-213ENST00000552000 CD101Q93033 1021 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 EXOC4Q96A65 974 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 IFT74Q96LB3 600 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 CNOT6LQ96LI5 555 aaKnown RBP5.83□□□□□ -1.48
HOXB3-213ENST00000552000 ACAP3Q96P50 834 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 SEPT5Q99719 369 aaPredicted RBP5.83□□□□□ -1.48
HOXB3-213ENST00000552000 ACO2Q99798 780 aaKnown RBP5.83□□□□□ -1.48
HOXB3-213ENST00000552000 KRTAP4-7Q9BYR0 210 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 AGXT2Q9BYV1 514 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 TTC12Q9H892 705 aaPredicted RBP5.83□□□□□ -1.48
HOXB3-213ENST00000552000 ETNK1Q9HBU6 452 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 GJB4Q9NTQ9 266 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 CACNA2D2Q9NY47 1150 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 CNTN3Q9P232 1028 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 TUBGCP4Q9UGJ1 667 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 TBX20Q9UMR3 447 aa5.83□□□□□ -1.48
HOXB3-213ENST00000552000 USP9YO00507 2555 aaPredicted RBP5.82□□□□□ -1.48
HOXB3-213ENST00000552000 DOPEY1Q5JWR5 2465 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 ARHGEF35A5YM69 484 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 K7ERI5 159 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 M0R082 166 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 MED24O75448 989 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 FTH1P19P0C7X4 201 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 CD59P13987 128 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 HNRNPLP14866 589 aaKnown RBP eCLIP5.82□□□□□ -1.483e-6■■■■□ 20
HOXB3-213ENST00000552000 ATF6P18850 670 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 ITPKAP23677 461 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 NMT1P30419 496 aaKnown RBP5.82□□□□□ -1.48
HOXB3-213ENST00000552000 P2RY2P41231 377 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 GUCY2FP51841 1108 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 EVCP57679 992 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 GFPT1Q06210 699 aaPredicted RBP5.82□□□□□ -1.48
HOXB3-213ENST00000552000 SPAG1Q07617 926 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 USP4Q13107 963 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 STK3Q13188 491 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 MYBPC2Q14324 1141 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 PDGFRLQ15198 375 aa5.82□□□□□ -1.48
HOXB3-213ENST00000552000 TRIP6Q15654 476 aaKnown RBP5.82□□□□□ -1.48
HOXB3-213ENST00000552000 TAF12Q16514 161 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms