RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 MYO1EQ12965 1108 aa23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 COL9A2Q14055 689 aaPredicted RBP23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 MAP7D1Q3KQU3 841 aa23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 RRAGBQ5VZM2 374 aa23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 BRAPQ7Z569 592 aa23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 GPD1LQ8N335 351 aa23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 MYCBPAPQ8TBZ2 947 aa23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 ANKRD36BP1Q96IX9 119 aa23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 CLIC6Q96NY7 704 aa23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 TMEM30AQ9NV96 361 aa23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 CCDC39Q9UFE4 941 aa23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 FBXO2Q9UK22 296 aaPredicted RBP23.11■■□□□ 1.29
SMARCD1-212ENST00000551966 ASPMQ8IZT6 3477 aa23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 SPEGQ15772 3267 aa23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 FRMD3A2A2Y4 597 aa23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 TMEM8BA6NDV4 472 aa23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 F8VP50 259 aa23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 MAP3K13O43283 966 aa23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 OAS1P00973 400 aaKnown RBP23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 CACNA2D1P54289 1103 aa23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 NOP14P78316 857 aaKnown RBP23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 LMAN2Q12907 356 aa23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 MAPRE1Q15691 268 aaKnown RBP23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 KIAA1211LQ6NV74 962 aa23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 SYT12Q8IV01 421 aa23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 PHTF2Q8N3S3 785 aa23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 WHAMMQ8TF30 809 aa23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 MRPL45Q9BRJ2 306 aaKnown RBP23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 NUSAP1Q9BXS6 441 aaKnown RBP23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 CFAP97Q9P2B7 532 aa23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 CIZ1Q9ULV3 898 aaPredicted RBP23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 ASCC3Q8N3C0 2202 aaKnown RBP23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 TNRC6BQ9UPQ9 1833 aaKnown RBP23.1■■□□□ 1.29
SMARCD1-212ENST00000551966 MYOFQ9NZM1 2061 aa23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 HYAL3O43820 417 aaPredicted RBP23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 ABL1P00519 1130 aa23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 CST3P01034 146 aaPredicted RBP23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 IDEP14735 1019 aa23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 ENGP17813 658 aa23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 ANXA13P27216 316 aa23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 EIF2DP41214 584 aaKnown RBP23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 MAPK8P45983 427 aa23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 PPP3CCP48454 512 aa23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 TAF10Q12962 218 aa23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 SLC23A3Q6PIS1 610 aa23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 PIP4P1Q86T03 277 aa23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 CBWD2Q8IUF1 395 aa23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 C8orf48Q96LL4 319 aa23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 PANK2Q9BZ23 570 aa23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 POLMQ9NP87 494 aaPredicted RBP23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 FSCN3Q9NQT6 498 aa23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 SRPRBQ9Y5M8 271 aaKnown RBP23.09■■□□□ 1.29
SMARCD1-212ENST00000551966 SLC9A3R1O14745 358 aaPredicted RBP23.08■■□□□ 1.29
SMARCD1-212ENST00000551966 TRIM66O15016 1216 aa23.08■■□□□ 1.29
SMARCD1-212ENST00000551966 APODP05090 189 aa23.08■■□□□ 1.29
SMARCD1-212ENST00000551966 GRIA2P42262 883 aa23.08■■□□□ 1.29
SMARCD1-212ENST00000551966 TNFRSF4P43489 277 aa23.08■■□□□ 1.29
SMARCD1-212ENST00000551966 RESTQ13127 1097 aa23.08■■□□□ 1.29
SMARCD1-212ENST00000551966 DUOXA2Q1HG44 320 aa23.08■■□□□ 1.29
SMARCD1-212ENST00000551966 HSF5Q4G112 596 aaPredicted RBP23.08■■□□□ 1.29
SMARCD1-212ENST00000551966 MDH1BQ5I0G3 518 aa23.08■■□□□ 1.29
SMARCD1-212ENST00000551966 EOGTQ5NDL2 527 aa23.08■■□□□ 1.29
SMARCD1-212ENST00000551966 GLIS3Q8NEA6 775 aa23.08■■□□□ 1.29
SMARCD1-212ENST00000551966 HMGB4Q8WW32 186 aa23.08■■□□□ 1.29
SMARCD1-212ENST00000551966 ARHGEF4Q9NR80 690 aa23.08■■□□□ 1.29
SMARCD1-212ENST00000551966 PANK4Q9NVE7 773 aa23.08■■□□□ 1.29
SMARCD1-212ENST00000551966 PILRBQ9UKJ0 227 aa23.08■■□□□ 1.29
SMARCD1-212ENST00000551966 AKAP13Q12802 2813 aa23.08■■□□□ 1.28
SMARCD1-212ENST00000551966 FAM208BQ5VWN6 2430 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 A0A087X0B3 334 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 SPAARA0A1B0GVQ0 90 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 TNNC2P02585 160 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 ITPKAP23677 461 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 GNL1P36915 607 aaPredicted RBP23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 KDSRQ06136 332 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 SEMA3BQ13214 749 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 ALCAMQ13740 583 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 SPDYCQ5MJ68 293 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 LY6G5CQ5SRR4 150 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 PEAR1Q5VY43 1037 aaPredicted RBP23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 ERICH6BQ5W0A0 696 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 SPACA7Q96KW9 195 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 MMS19Q96T76 1030 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 SLC32A1Q9H598 525 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 EHD2Q9NZN4 543 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 BCCIPQ9P287 314 aaKnown RBP eCLIP23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 KLK13Q9UKR3 277 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 HCN2Q9UL51 889 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 R3HCC1Q9Y3T6 440 aaKnown RBP23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 NEUROG3Q9Y4Z2 214 aa23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 ATXN2Q99700 1313 aaKnown RBP23.07■■□□□ 1.28
SMARCD1-212ENST00000551966 PCNX2A6NKB5 2137 aa23.06■■□□□ 1.28
SMARCD1-212ENST00000551966 TCRBV21S2A2A0A5A6 115 aa23.06■■□□□ 1.28
SMARCD1-212ENST00000551966 ZNF233A6NK53 670 aa23.06■■□□□ 1.28
SMARCD1-212ENST00000551966 ADH5P11766 374 aa23.06■■□□□ 1.28
SMARCD1-212ENST00000551966 PTPN1P18031 435 aaKnown RBP23.06■■□□□ 1.28
SMARCD1-212ENST00000551966 HOXD13P35453 343 aa23.06■■□□□ 1.28
SMARCD1-212ENST00000551966 TDRD10Q5VZ19 366 aaKnown RBP23.06■■□□□ 1.28
SMARCD1-212ENST00000551966 HS2ST1Q7LGA3 356 aa23.06■■□□□ 1.28
SMARCD1-212ENST00000551966 TRAPPC11Q7Z392 1133 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms