RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 UNC5BQ8IZJ1 945 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 SPICE1Q8N0Z3 855 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 BCL6BQ8N143 479 aaPredicted RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 SAMD3Q8N6K7 520 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 PLA2G15Q8NCC3 412 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 ZBTB34Q8NCN2 500 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 NEK9Q8TD19 979 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 FNIP1Q8TF40 1166 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 SDR42E1Q8WUS8 393 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 SNX33Q8WV41 574 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 KAT2BQ92831 832 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 PMM1Q92871 262 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 LPPQ93052 612 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 RPS6KC1Q96S38 1066 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 UHRF1Q96T88 793 aaPredicted RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 MPHOSPH6Q99547 160 aaKnown RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 FDXACB1Q9BRP7 624 aaPredicted RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 SOX7Q9BT81 388 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 PAGR1Q9BTK6 254 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 ZNF700Q9H0M5 742 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 TMEM168Q9H0V1 697 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 MANSC1Q9H8J5 431 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 KCNK12Q9HB15 430 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 BARX1Q9HBU1 254 aaPredicted RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 GCM1Q9NP62 436 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 IL23AQ9NPF7 189 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 XPNPEP3Q9NQH7 507 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 PDGFCQ9NRA1 345 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 TMOD4Q9NZQ9 345 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 NTMQ9P121 344 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 SCOCQ9UIL1 159 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 FAM184BQ9ULE4 1060 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 CNOT6Q9ULM6 557 aaKnown RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 FAM50BQ9Y247 325 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 POLHQ9Y253 713 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 ATP11BQ9Y2G3 1177 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 Q9Y3F1 56 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 IPPQ9Y573 584 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 PCDHA13Q9Y5I0 950 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 CFAP20Q9Y6A4 193 aaKnown RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 KMT2BQ9UMN6 2715 aaPredicted RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 PTPRZ1P23471 2315 aaPredicted RBP2.77□□□□□ -1.97
CPSF6-207ENST00000551516 MYH2Q9UKX2 1941 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 FRMPD3Q5JV73 1810 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 DOCK2Q92608 1830 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 CHD6Q8TD26 2715 aa2.77□□□□□ -1.97
CPSF6-207ENST00000551516 ZNF532Q9HCE3 1301 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 A0A1W2PR48 441 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ANO9A1A5B4 782 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 TCAF2A6NFQ2 919 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 FAM227AF5H4B4 570 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 F5H6K3 240 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 HAS3O00219 553 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ETV2O00321 342 aaPredicted RBP2.76□□□□□ -1.97
CPSF6-207ENST00000551516 DDX3XO00571 662 aaKnown RBP eCLIP2.76□□□□□ -1.974e-13■□□□□ 9.3
CPSF6-207ENST00000551516 TPP1O14773 563 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 SGTAO43765 313 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 B3GALT2O43825 422 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 NBNO60934 754 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ARIH2O95376 493 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 BAG3O95817 575 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 SLC25A27O95847 323 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ZBED1O96006 694 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 FTLP02792 175 aaPredicted RBP2.76□□□□□ -1.97
CPSF6-207ENST00000551516 PLA2G1BP04054 148 aaKnown RBP2.76□□□□□ -1.97
CPSF6-207ENST00000551516 GNAI2P04899 355 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 SNHG28P0DPA3 235 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 MYBP10242 640 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 GAAP10253 952 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 AKR1A1P14550 325 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 HNRNPLP14866 589 aaKnown RBP eCLIP2.76□□□□□ -1.976e-8■■■□□ 16.3
CPSF6-207ENST00000551516 ZNF28P17035 718 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ATP5JP18859 108 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 GLDCP23378 1020 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ECHS1P30084 290 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 IL12RB1P42701 662 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ETV4P43268 484 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 RABGGTBP53611 331 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 OAZ1P54368 228 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 FAM193AP78312 1265 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 CCNA1P78396 465 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 MRPS5P82675 430 aaKnown RBP2.76□□□□□ -1.97
CPSF6-207ENST00000551516 KLRC3Q07444 240 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 PPP3CAQ08209 521 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 MGAT2Q10469 447 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ADAM15Q13444 863 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 IL10RAQ13651 578 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ACVR2BQ13705 512 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 PCOLCEQ15113 449 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 KIAA0753Q2KHM9 967 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 C3orf36Q3SXR2 165 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ANO6Q4KMQ2 910 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ZNF385BQ569K4 471 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ZMAT1Q5H9K5 638 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 GORABQ5T7V8 394 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 IL31Q6EBC2 164 aa2.76□□□□□ -1.97
CPSF6-207ENST00000551516 DARS2Q6PI48 645 aaKnown RBP2.76□□□□□ -1.97
CPSF6-207ENST00000551516 ABHD15Q6UXT9 468 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms