RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 CGRRF1Q99675 332 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 BLZF1Q9H2G9 400 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 SNX25Q9H3E2 840 aa19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 MYO18AQ92614 2054 aaKnown RBP19.08■□□□□ 0.64
PRPF40B-215ENST00000551418 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 BCLAF3A2AJT9 711 aaKnown RBP19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 EIF3DO15371 548 aaKnown RBP eCLIP19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 TACC1O75410 805 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 NFATC1O95644 943 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 CAVIN2O95810 425 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 OLFM2O95897 454 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 OAS1P00973 400 aaKnown RBP19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 GBP1P32455 592 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 CASP4P49662 377 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 SLC7A9P82251 487 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 DHCR24Q15392 516 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 MAPRE1Q15691 268 aaKnown RBP19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 WDR72Q3MJ13 1102 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 FAM26FQ5R3K3 315 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 ANO7Q6IWH7 933 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 RHBDF2Q6PJF5 856 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 STXBP4Q6ZWJ1 553 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 FRMD1Q8N878 549 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 TSTD1Q8NFU3 115 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 DDX1Q92499 740 aaKnown RBP19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 ACDQ96AP0 544 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 INTS4Q96HW7 963 aaKnown RBP19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 LSM14BQ9BX40 385 aaKnown RBP19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 ZSCAN16Q9H4T2 348 aaPredicted RBP19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 KIAA1586Q9HCI6 787 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 CFAP97Q9P2B7 532 aa19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 NXF1Q9UBU9 619 aaKnown RBP19.07■□□□□ 0.64
PRPF40B-215ENST00000551418 PATE3B3GLJ2 98 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 GIPC1O14908 333 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 TRIM66O15016 1216 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 RHOBTB1O94844 696 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 KCNK5O95279 499 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 CDH8P55286 799 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 NOP14P78316 857 aaKnown RBP19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 EHHADHQ08426 723 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 ELF2Q15723 593 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 FOXD4L6Q3SYB3 417 aaPredicted RBP19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 RNF43Q68DV7 783 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 FOXD4L3Q6VB84 417 aaPredicted RBP19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 RASSF3Q86WH2 238 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 TTC30AQ86WT1 665 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 WBP2Q969T9 261 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 EXOC4Q96A65 974 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 KCNK16Q96T55 309 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 C7orf25Q9BPX7 421 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 XYLT2Q9H1B5 865 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 CHORDC1Q9UHD1 332 aaPredicted RBP19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 GON4LQ3T8J9 2241 aa19.06■□□□□ 0.64
PRPF40B-215ENST00000551418 C4orf47A7E2U8 309 aa19.05■□□□□ 0.64
PRPF40B-215ENST00000551418 PMS2CLQ68D20 193 aa19.05■□□□□ 0.64
PRPF40B-215ENST00000551418 CNNM4Q6P4Q7 775 aa19.05■□□□□ 0.64
PRPF40B-215ENST00000551418 PAQR9Q6ZVX9 377 aa19.05■□□□□ 0.64
PRPF40B-215ENST00000551418 ALLCQ8N6M5 410 aa19.05■□□□□ 0.64
PRPF40B-215ENST00000551418 XXYLT1Q8NBI6 393 aa19.05■□□□□ 0.64
PRPF40B-215ENST00000551418 MDGA1Q8NFP4 955 aa19.05■□□□□ 0.64
PRPF40B-215ENST00000551418 SCAMP5Q8TAC9 235 aa19.05■□□□□ 0.64
PRPF40B-215ENST00000551418 RLN3Q8WXF3 142 aa19.05■□□□□ 0.64
PRPF40B-215ENST00000551418 EDEM2Q9BV94 578 aa19.05■□□□□ 0.64
PRPF40B-215ENST00000551418 SMYD3Q9H7B4 428 aa19.05■□□□□ 0.64
PRPF40B-215ENST00000551418 SLC39A2Q9NP94 309 aa19.05■□□□□ 0.64
PRPF40B-215ENST00000551418 MMP17Q9ULZ9 603 aa19.05■□□□□ 0.64
PRPF40B-215ENST00000551418 A8MXQ7 604 aa19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 SGK1O00141 431 aa19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 PPP6R2O75170 966 aa19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 PFKLP17858 780 aa19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 TIE1P35590 1138 aa19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 PGFP49763 221 aa19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 TNNC1P63316 161 aa19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 CRY1Q16526 586 aa19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 TDRD10Q5VZ19 366 aaKnown RBP19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 GRAMD1CQ8IYS0 662 aa19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 IL17RCQ8NAC3 791 aa19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 B3GALNT2Q8NCR0 500 aa19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 ZFRQ96KR1 1074 aaKnown RBP19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 CEP295NLQ96MC4 621 aa19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 FNBP1Q96RU3 617 aa19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 LRRC27Q9C0I9 530 aa19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 SDCBP2Q9H190 292 aa19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 ANGPTL2Q9UKU9 493 aa19.04■□□□□ 0.64
PRPF40B-215ENST00000551418 LNP1A1A4G5 178 aa19.03■□□□□ 0.64
PRPF40B-215ENST00000551418 POLR2DO15514 142 aaKnown RBP19.03■□□□□ 0.64
PRPF40B-215ENST00000551418 COCHO43405 550 aa19.03■□□□□ 0.64
PRPF40B-215ENST00000551418 CUTAO60888 179 aa19.03■□□□□ 0.64
PRPF40B-215ENST00000551418 KLF8O95600 359 aaPredicted RBP19.03■□□□□ 0.64
PRPF40B-215ENST00000551418 MBL2P11226 248 aaPredicted RBP19.03■□□□□ 0.64
PRPF40B-215ENST00000551418 PDE6CP51160 858 aa19.03■□□□□ 0.64
PRPF40B-215ENST00000551418 KDSRQ06136 332 aa19.03■□□□□ 0.64
PRPF40B-215ENST00000551418 USP39Q53GS9 565 aaKnown RBP19.03■□□□□ 0.64
PRPF40B-215ENST00000551418 PSAPL1Q6NUJ1 521 aa19.03■□□□□ 0.64
PRPF40B-215ENST00000551418 UNC13DQ70J99 1090 aa19.03■□□□□ 0.64
PRPF40B-215ENST00000551418 IQUBQ8NA54 791 aa19.03■□□□□ 0.64
PRPF40B-215ENST00000551418 TXNDC5Q8NBS9 432 aaKnown RBP19.03■□□□□ 0.64
PRPF40B-215ENST00000551418 CNOT6LQ96LI5 555 aaKnown RBP19.03■□□□□ 0.64
PRPF40B-215ENST00000551418 CUEDC2Q9H467 287 aa19.03■□□□□ 0.64
PRPF40B-215ENST00000551418 KAT7O95251 611 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms