RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 SLITRK6Q9H5Y7 841 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 LIMD1Q9UGP4 676 aa17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 ZFP37Q9Y6Q3 630 aaPredicted RBP17.15■□□□□ 0.34
CHMP1A-209ENST00000550872 GREB1Q4ZG55 1949 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 HHLA1C9JL84 531 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 F8VZ95 297 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 M0QYV0 167 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 TNFRSF10BO14763 440 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 CLCN1P35523 988 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 CYP4F8P98187 520 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 TAF10Q12962 218 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 GPR158Q5T848 1215 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 CACNA2D4Q7Z3S7 1137 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 TMEM150AQ86TG1 271 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 PIGZQ86VD9 579 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 MRPS31Q92665 395 aaKnown RBP17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 FBXO32Q969P5 355 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 SLITRK1Q96PX8 696 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 UBXN6Q9BZV1 441 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 PNPLA8Q9NP80 782 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 COMMD8Q9NX08 183 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 GDE1Q9NZC3 331 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 TRPM5Q9NZQ8 1165 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 EPS15L1Q9UBC2 864 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 MYO10Q9HD67 2058 aa17.14■□□□□ 0.33
CHMP1A-209ENST00000550872 XPO1O14980 1071 aaKnown RBP17.13■□□□□ 0.33
CHMP1A-209ENST00000550872 TPM3P06753 285 aa17.13■□□□□ 0.33
CHMP1A-209ENST00000550872 SETSIPP0DME0 302 aa17.13■□□□□ 0.33
CHMP1A-209ENST00000550872 SOX5P35711 763 aa17.13■□□□□ 0.33
CHMP1A-209ENST00000550872 STAT1P42224 750 aa17.13■□□□□ 0.33
CHMP1A-209ENST00000550872 PKDCCQ504Y2 493 aa17.13■□□□□ 0.33
CHMP1A-209ENST00000550872 STXBP5Q5T5C0 1151 aa17.13■□□□□ 0.33
CHMP1A-209ENST00000550872 GPRIN1Q7Z2K8 1008 aa17.13■□□□□ 0.33
CHMP1A-209ENST00000550872 SLC47A2Q86VL8 602 aa17.13■□□□□ 0.33
CHMP1A-209ENST00000550872 SECISBP2LQ93073 1101 aaKnown RBP17.13■□□□□ 0.33
CHMP1A-209ENST00000550872 FBXO44Q9H4M3 255 aa17.13■□□□□ 0.33
CHMP1A-209ENST00000550872 CD320Q9NPF0 282 aa17.13■□□□□ 0.33
CHMP1A-209ENST00000550872 IL37Q9NZH6 218 aa17.13■□□□□ 0.33
CHMP1A-209ENST00000550872 ZNF638Q14966 1978 aaKnown RBP17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 TULP2O00295 520 aa17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 CBFA2T2O43439 604 aa17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 GFPT2O94808 682 aa17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 ABL1P00519 1130 aa17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 JAM2P57087 298 aa17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 PLCB2Q00722 1185 aa17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 DENND1BQ6P3S1 775 aa17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 POTEHQ6S545 545 aa17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 GAS2L3Q86XJ1 694 aa17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 ST13P5Q8NFI4 369 aaPredicted RBP17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 ZSWIM3Q96MP5 696 aa17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 XPO4Q9C0E2 1151 aaKnown RBP17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 RBSNQ9H1K0 784 aa17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 TASP1Q9H6P5 420 aa17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 LRRC4Q9HBW1 653 aa17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 CHORDC1Q9UHD1 332 aaPredicted RBP17.12■□□□□ 0.33
CHMP1A-209ENST00000550872 TADA3O75528 432 aa17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 KRT9P35527 623 aa17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 PLA2G4AP47712 749 aa17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 PPP3CCP48454 512 aa17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 KIF11P52732 1056 aa17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 FAM78AQ5JUQ0 283 aa17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 TXNDC8Q6A555 127 aa17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 MON1AQ86VX9 555 aa17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 RNF135Q8IUD6 432 aa17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 GPIHBP1Q8IV16 184 aa17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 MAB21L3Q8N8X9 362 aa17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 PDZD8Q8NEN9 1154 aa17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 ZSCAN18Q8TBC5 510 aaPredicted RBP17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 SLC35F5Q8WV83 523 aa17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 SLC46A2Q9BY10 475 aa17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 PDCL3Q9H2J4 239 aa17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 ZMYM5Q9UJ78 669 aa17.11■□□□□ 0.33
CHMP1A-209ENST00000550872 FAM92AA1XBS5 289 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 ZNF840PA6NDX5 716 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 ASGR2P07307 311 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 CFHP08603 1231 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 CYP11B1P15538 503 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 DDX6P26196 483 aaKnown RBP eCLIP17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 PBX1P40424 430 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 GPD2P43304 727 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 RGS7P49802 495 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 PDE6CP51160 858 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 TKTL1P51854 596 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 MEA1Q16626 185 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 RAB41Q5JT25 222 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 PMF1Q6P1K2 205 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 PARM1Q6UWI2 310 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 KCTD13Q8WZ19 329 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 OVCA2Q8WZ82 227 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 NUP58Q9BVL2 599 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 KCNK12Q9HB15 430 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 TRPC7Q9HCX4 862 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 GMIPQ9P107 970 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 IGSF9Q9P2J2 1179 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 PCDHGC3Q9UN70 934 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 SCML2Q9UQR0 700 aa17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 ARIH1Q9Y4X5 557 aaPredicted RBP17.1■□□□□ 0.33
CHMP1A-209ENST00000550872 SOBPA7XYQ1 873 aa17.09■□□□□ 0.33
CHMP1A-209ENST00000550872 ANHXE9PGG2 379 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms