RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 RHCEP18577 417 aa6.38□□□□□ -1.39
LETMD1-226ENST00000550755 RPL17P18621 184 aaKnown RBP6.38□□□□□ -1.39
LETMD1-226ENST00000550755 MTHFSP49914 203 aa6.38□□□□□ -1.39
LETMD1-226ENST00000550755 RHDQ02161 417 aa6.38□□□□□ -1.39
LETMD1-226ENST00000550755 MTHFD1LQ6UB35 978 aa6.38□□□□□ -1.39
LETMD1-226ENST00000550755 CAND1Q86VP6 1230 aaKnown RBP6.38□□□□□ -1.39
LETMD1-226ENST00000550755 MICU3Q86XE3 530 aa6.38□□□□□ -1.39
LETMD1-226ENST00000550755 TMEM171Q8WVE6 324 aa6.38□□□□□ -1.39
LETMD1-226ENST00000550755 GBA2Q9HCG7 927 aaPredicted RBP6.38□□□□□ -1.39
LETMD1-226ENST00000550755 SNX14Q9Y5W7 946 aa6.38□□□□□ -1.39
LETMD1-226ENST00000550755 CDY1Q9Y6F8 540 aa6.38□□□□□ -1.39
LETMD1-226ENST00000550755 CCP110O43303 1012 aa6.37□□□□□ -1.39
LETMD1-226ENST00000550755 RBMXL2O75526 392 aaKnown RBP6.37□□□□□ -1.39
LETMD1-226ENST00000550755 INMTO95050 263 aa6.37□□□□□ -1.39
LETMD1-226ENST00000550755 RPS16P62249 146 aaKnown RBP6.37□□□□□ -1.39
LETMD1-226ENST00000550755 SLC29A2Q14542 456 aa6.37□□□□□ -1.39
LETMD1-226ENST00000550755 Q6ZWC4 215 aa6.37□□□□□ -1.39
LETMD1-226ENST00000550755 RAB11FIP4Q86YS3 637 aa6.37□□□□□ -1.39
LETMD1-226ENST00000550755 YAF2Q8IY57 180 aa6.37□□□□□ -1.39
LETMD1-226ENST00000550755 C17orf80Q9BSJ5 609 aa6.37□□□□□ -1.39
LETMD1-226ENST00000550755 FSD1LQ9BXM9 530 aa6.37□□□□□ -1.39
LETMD1-226ENST00000550755 NUP62CLQ9H1M0 184 aa6.37□□□□□ -1.39
LETMD1-226ENST00000550755 ITGB1BP2Q9UKP3 347 aa6.37□□□□□ -1.39
LETMD1-226ENST00000550755 USP22Q9UPT9 525 aa6.37□□□□□ -1.39
LETMD1-226ENST00000550755 MANSC4A6NHS7 340 aaPredicted RBP6.36□□□□□ -1.39
LETMD1-226ENST00000550755 SRGAP2O75044 1071 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 ERBB2P04626 1255 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 PRKCGP05129 697 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 EPHA3P29320 983 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 BCAT1P54687 386 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 TBX4P57082 545 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 RHBDL3P58872 404 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 SLC10A2Q12908 348 aaPredicted RBP6.36□□□□□ -1.39
LETMD1-226ENST00000550755 ARHGEF7Q14155 803 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 LY6KQ17RY6 165 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 TMEM119Q4V9L6 283 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 KIAA1614Q5VZ46 1190 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 SLC9A4Q6AI14 798 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 ZDHHC24Q6UX98 284 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 NAPRTQ6XQN6 538 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 DGKHQ86XP1 1220 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 DNAJB14Q8TBM8 379 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 VOPP1Q96AW1 172 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 RSPRY1Q96DX4 576 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 TERF2IPQ9NYB0 399 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 TBC1D30Q9Y2I9 924 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 SNX13Q9Y5W8 968 aa6.36□□□□□ -1.39
LETMD1-226ENST00000550755 PCSK5Q92824 1860 aa6.35□□□□□ -1.39
LETMD1-226ENST00000550755 H7C4K7 107 aa6.35□□□□□ -1.39
LETMD1-226ENST00000550755 PRC1O43663 620 aa6.35□□□□□ -1.39
LETMD1-226ENST00000550755 PTDSS1P48651 473 aaKnown RBP6.35□□□□□ -1.39
LETMD1-226ENST00000550755 PROK1P58294 105 aa6.35□□□□□ -1.39
LETMD1-226ENST00000550755 SUMO2P61956 95 aaKnown RBP6.35□□□□□ -1.39
LETMD1-226ENST00000550755 SETQ01105 290 aaPredicted RBP6.35□□□□□ -1.39
LETMD1-226ENST00000550755 GRM1Q13255 1194 aa6.35□□□□□ -1.39
LETMD1-226ENST00000550755 BIRC2Q13490 618 aa6.35□□□□□ -1.39
LETMD1-226ENST00000550755 PTCHD3Q3KNS1 767 aa6.35□□□□□ -1.39
LETMD1-226ENST00000550755 L1TD1Q5T7N2 865 aaKnown RBP6.35□□□□□ -1.39
LETMD1-226ENST00000550755 SIRT6Q8N6T7 355 aa6.35□□□□□ -1.39
LETMD1-226ENST00000550755 DAZAP1Q96EP5 407 aaKnown RBP6.35□□□□□ -1.39
LETMD1-226ENST00000550755 DHX36Q9H2U1 1008 aaKnown RBP6.35□□□□□ -1.39
LETMD1-226ENST00000550755 GEMIN8Q9NWZ8 242 aaKnown RBP6.35□□□□□ -1.39
LETMD1-226ENST00000550755 TFCP2L1Q9NZI6 479 aa6.35□□□□□ -1.39
LETMD1-226ENST00000550755 COL20A1Q9P218 1284 aa6.35□□□□□ -1.39
LETMD1-226ENST00000550755 PCDHGB6Q9Y5F9 930 aa6.35□□□□□ -1.39
LETMD1-226ENST00000550755 AOX1Q06278 1338 aa6.34□□□□□ -1.39
LETMD1-226ENST00000550755 A0A0U1RQG5 324 aaPredicted RBP6.34□□□□□ -1.39
LETMD1-226ENST00000550755 AQP7P3A6NL99 342 aa6.34□□□□□ -1.39
LETMD1-226ENST00000550755 LINC01548A6NM66 108 aa6.34□□□□□ -1.39
LETMD1-226ENST00000550755 SMIM22K7EJ46 135 aa6.34□□□□□ -1.39
LETMD1-226ENST00000550755 RAB27BO00194 218 aa6.34□□□□□ -1.39
LETMD1-226ENST00000550755 FOXN3O00409 490 aaPredicted RBP6.34□□□□□ -1.39
LETMD1-226ENST00000550755 PIAS2O75928 621 aa6.34□□□□□ -1.39
LETMD1-226ENST00000550755 TJP3O95049 919 aa6.34□□□□□ -1.39
LETMD1-226ENST00000550755 TPH1P17752 444 aa6.34□□□□□ -1.39
LETMD1-226ENST00000550755 HOXA4Q00056 320 aaPredicted RBP6.34□□□□□ -1.39
LETMD1-226ENST00000550755 SRSF4Q08170 494 aaKnown RBP6.34□□□□□ -1.39
LETMD1-226ENST00000550755 SEMA5AQ13591 1074 aa6.34□□□□□ -1.39
LETMD1-226ENST00000550755 SDR16C5Q8N3Y7 309 aa6.34□□□□□ -1.39
LETMD1-226ENST00000550755 SEMA6DQ8NFY4 1073 aa6.34□□□□□ -1.39
LETMD1-226ENST00000550755 EVI5LQ96CN4 794 aa6.34□□□□□ -1.39
LETMD1-226ENST00000550755 STRBPQ96SI9 672 aaKnown RBP6.34□□□□□ -1.39
LETMD1-226ENST00000550755 TRIM5Q9C035 493 aa6.34□□□□□ -1.39
LETMD1-226ENST00000550755 BTBD1Q9H0C5 482 aa6.34□□□□□ -1.39
LETMD1-226ENST00000550755 DNMT3BQ9UBC3 853 aaKnown RBP6.34□□□□□ -1.39
LETMD1-226ENST00000550755 GABRQQ9UN88 632 aa6.34□□□□□ -1.39
LETMD1-226ENST00000550755 FRMD4BQ9Y2L6 1034 aa6.34□□□□□ -1.39
LETMD1-226ENST00000550755 FNDC1Q4ZHG4 1894 aaPredicted RBP6.33□□□□□ -1.4
LETMD1-226ENST00000550755 AP4M1O00189 453 aa6.33□□□□□ -1.4
LETMD1-226ENST00000550755 ZNF213O14771 459 aa6.33□□□□□ -1.4
LETMD1-226ENST00000550755 RRP9O43818 475 aaKnown RBP6.33□□□□□ -1.4
LETMD1-226ENST00000550755 SH3BP5O60239 455 aa6.33□□□□□ -1.4
LETMD1-226ENST00000550755 VNN1O95497 513 aa6.33□□□□□ -1.4
LETMD1-226ENST00000550755 TXNP10599 105 aaKnown RBP6.33□□□□□ -1.4
LETMD1-226ENST00000550755 ACVR2AP27037 513 aa6.33□□□□□ -1.4
LETMD1-226ENST00000550755 CTGFP29279 349 aa6.33□□□□□ -1.4
LETMD1-226ENST00000550755 CPT1AP50416 773 aa6.33□□□□□ -1.4
LETMD1-226ENST00000550755 ITGA8P53708 1063 aa6.33□□□□□ -1.4
LETMD1-226ENST00000550755 CYP4F2P78329 520 aa6.33□□□□□ -1.4
LETMD1-226ENST00000550755 E2F1Q01094 437 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms