RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 PCDHAC1Q9H158 963 aa5.77□□□□□ -1.49
LIMA1-205ENST00000550592 TSC22D4Q9Y3Q8 395 aa5.77□□□□□ -1.49
LIMA1-205ENST00000550592 FGD5Q6ZNL6 1462 aa5.77□□□□□ -1.49
LIMA1-205ENST00000550592 TRGV11A0A075B6L2 103 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 SYT5O00445 386 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 CD3EAPO15446 510 aaKnown RBP5.76□□□□□ -1.49
LIMA1-205ENST00000550592 RGS10O43665 173 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 COQ9O75208 318 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 SRGNP10124 158 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 ZNF20P17024 532 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 ITGA8P53708 1063 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 CCNIQ14094 377 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 SPDYAQ5MJ70 313 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 TMTC4Q5T4D3 741 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 FAXCQ5TGI0 409 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 ATG16L2Q8NAA4 619 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 DNAJB14Q8TBM8 379 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 FAM71BQ8TC56 605 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 IPO4Q8TEX9 1081 aaKnown RBP5.76□□□□□ -1.49
LIMA1-205ENST00000550592 PPM1EQ8WY54 764 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 FAM136AQ96C01 138 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 ZDHHC12Q96GR4 267 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 ZNF668Q96K58 619 aaPredicted RBP5.76□□□□□ -1.49
LIMA1-205ENST00000550592 ISCA1Q9BUE6 129 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 MYLK2Q9H1R3 596 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 GBA2Q9HCG7 927 aaPredicted RBP5.76□□□□□ -1.49
LIMA1-205ENST00000550592 LUZP4Q9P127 313 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 FZD1Q9UP38 647 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 HPSEQ9Y251 543 aa5.76□□□□□ -1.49
LIMA1-205ENST00000550592 PBRM1Q86U86 1689 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 TOP2AP11388 1531 aaKnown RBP5.75□□□□□ -1.49
LIMA1-205ENST00000550592 OR2W5A6NFC9 320 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 PIP5K1BO14986 540 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 SRGAP2O75044 1071 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 PPFIA4O75335 1185 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 SPDEFO95238 335 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 ITGA5P08648 1049 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 SLC5A2P31639 672 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 PDE6CP51160 858 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 BCAT1P54687 386 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 SCAPQ12770 1279 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 EFEMP1Q12805 493 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 FZD5Q13467 585 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 ARHGAP15Q53QZ3 475 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 CERCAMQ5T4B2 595 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 LDHAL6AQ6ZMR3 332 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 RNF207Q6ZRF8 634 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 ARHGEF19Q8IW93 802 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 LENG9Q96B70 501 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 EID2BQ96D98 161 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 DACT1Q9NYF0 836 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 TMOD4Q9NZQ9 345 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 SERTAD3Q9UJW9 196 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 CA14Q9ULX7 337 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 DTNAQ9Y4J8 743 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 ADAMTSL3P82987 1691 aa5.75□□□□□ -1.49
LIMA1-205ENST00000550592 AQP12BA6NM10 295 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 ACKR2O00590 384 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 GLP2RO95838 553 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 FGAP02671 866 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 PECAM1P16284 738 aaPredicted RBP5.74□□□□□ -1.49
LIMA1-205ENST00000550592 MST1P26927 711 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 PRKAR1BP31321 381 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 UQCRC1P31930 480 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 HNRNPMP52272 730 aaKnown RBP eCLIP5.74□□□□□ -1.49
LIMA1-205ENST00000550592 ADAM17P78536 824 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 GUCY1B3Q02153 619 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 NSUN2Q08J23 767 aaKnown RBP eCLIP5.74□□□□□ -1.49
LIMA1-205ENST00000550592 TRIM71Q2Q1W2 868 aaKnown RBP5.74□□□□□ -1.49
LIMA1-205ENST00000550592 NRN1LQ496H8 165 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 TIGD2Q4W5G0 525 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 HSP90AB4PQ58FF6 505 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 RHOUQ7L0Q8 258 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 GPR149Q86SP6 731 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 DTX2Q86UW9 622 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 SMAP1Q8IYB5 467 aaPredicted RBP5.74□□□□□ -1.49
LIMA1-205ENST00000550592 ABRAQ8N0Z2 381 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 SLC30A5Q8TAD4 765 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 STYXQ8WUJ0 223 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 CACTINQ8WUQ7 758 aaKnown RBP5.74□□□□□ -1.49
LIMA1-205ENST00000550592 TRAPPC12Q8WVT3 735 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 SCLT1Q96NL6 688 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.74□□□□□ -1.49
LIMA1-205ENST00000550592 MAGEH1Q9H213 219 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 SLC25A32Q9H2D1 315 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 LRFN1Q9P244 771 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 GRHPRQ9UBQ7 328 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 DNAJB11Q9UBS4 358 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 VPS51Q9UID3 782 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 PCDHGB3Q9Y5G1 929 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 IQSEC2Q5JU85 1478 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 YEATS2Q9ULM3 1422 aa5.74□□□□□ -1.49
LIMA1-205ENST00000550592 MED1Q15648 1581 aaPredicted RBP5.73□□□□□ -1.49
LIMA1-205ENST00000550592 CCDC88BA6NC98 1476 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 CENPVL1A0A0U1RR11 272 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 UNC119BA6NIH7 251 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 ZAR1LA6NP61 321 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 ADM5C9JUS6 153 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 PPM1DO15297 605 aa5.73□□□□□ -1.49
LIMA1-205ENST00000550592 NTSR2O95665 410 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms