RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 CREB5Q02930 508 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 ST3GAL2Q16842 350 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 GAB4Q2WGN9 574 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 WDR72Q3MJ13 1102 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 C2orf27AQ580R0 203 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 RNF43Q68DV7 783 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 TCEAL6Q6IPX3 200 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 CNNM4Q6P4Q7 775 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 UNC13DQ70J99 1090 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 C11orf74Q86VG3 221 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 IQUBQ8NA54 791 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 XXYLT1Q8NBI6 393 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 B3GALNT2Q8NCR0 500 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 USP33Q8TEY7 942 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 TCEAL3Q969E4 200 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 ZNF396Q96N95 335 aaPredicted RBP11.56□□□□□ -0.56
PFDN5-210ENST00000550513 EDEM2Q9BV94 578 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 LINC00597Q9H2U6 94 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 DPEP3Q9H4B8 488 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 SMPD4Q9NXE4 827 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 MMP17Q9ULZ9 603 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 NME7Q9Y5B8 376 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 CPQQ9Y646 472 aa11.56□□□□□ -0.56
PFDN5-210ENST00000550513 CNOT1A5YKK6 2376 aaKnown RBP11.56□□□□□ -0.56
PFDN5-210ENST00000550513 A8MXQ7 604 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 K7EQS6 105 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 SLC9A3R1O14745 358 aaPredicted RBP11.55□□□□□ -0.56
PFDN5-210ENST00000550513 SCAMP3O14828 347 aaKnown RBP11.55□□□□□ -0.56
PFDN5-210ENST00000550513 KRT37O76014 449 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 STAU1O95793 577 aaKnown RBP11.55□□□□□ -0.56
PFDN5-210ENST00000550513 CST3P01034 146 aaPredicted RBP11.55□□□□□ -0.56
PFDN5-210ENST00000550513 MBL2P11226 248 aaPredicted RBP11.55□□□□□ -0.56
PFDN5-210ENST00000550513 PTPN1P18031 435 aaKnown RBP11.55□□□□□ -0.56
PFDN5-210ENST00000550513 SNRPFP62306 86 aaKnown RBP11.55□□□□□ -0.56
PFDN5-210ENST00000550513 TAF10Q12962 218 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 TRPC3Q13507 836 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 TDRD10Q5VZ19 366 aaKnown RBP11.55□□□□□ -0.56
PFDN5-210ENST00000550513 PMS2CLQ68D20 193 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 ANO7Q6IWH7 933 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 SHC4Q6S5L8 630 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 RASSF3Q86WH2 238 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 DDX42Q86XP3 938 aaKnown RBP eCLIP11.55□□□□□ -0.56
PFDN5-210ENST00000550513 KIAA1958Q8N8K9 716 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 PDZD8Q8NEN9 1154 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 MDGA1Q8NFP4 955 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 SCFD1Q8WVM8 642 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 SYAP1Q96A49 352 aaPredicted RBP11.55□□□□□ -0.56
PFDN5-210ENST00000550513 CHAMP1Q96JM3 812 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 CNOT6LQ96LI5 555 aaKnown RBP11.55□□□□□ -0.56
PFDN5-210ENST00000550513 C7orf25Q9BPX7 421 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 ZNF518BQ9C0D4 1074 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 TMEM30AQ9NV96 361 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 NXF1Q9UBU9 619 aaKnown RBP11.55□□□□□ -0.56
PFDN5-210ENST00000550513 ANGPTL2Q9UKU9 493 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 ATP8B3O60423 1300 aa11.55□□□□□ -0.56
PFDN5-210ENST00000550513 ZFHX4Q86UP3 3567 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 LNP1A1A4G5 178 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 BCLAF3A2AJT9 711 aaKnown RBP11.54□□□□□ -0.56
PFDN5-210ENST00000550513 PHACTR2O75167 634 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 RTN3O95197 1032 aaPredicted RBP11.54□□□□□ -0.56
PFDN5-210ENST00000550513 CAVIN2O95810 425 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 ADH1CP00326 375 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 CASP1P29466 404 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 EIF2DP41214 584 aaKnown RBP11.54□□□□□ -0.56
PFDN5-210ENST00000550513 MYL6P60660 151 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 MRPS21P82921 87 aaKnown RBP11.54□□□□□ -0.56
PFDN5-210ENST00000550513 KDSRQ06136 332 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 EHHADHQ08426 723 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 DHCR24Q15392 516 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 BMT2Q1RMZ1 405 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 ZNF699Q32M78 642 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 USP39Q53GS9 565 aaKnown RBP11.54□□□□□ -0.56
PFDN5-210ENST00000550513 SCARA5Q6ZMJ2 495 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 FAM35AQ86V20 835 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 TTC30AQ86WT1 665 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 C12orf56Q8IXR9 622 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 NUP93Q8N1F7 819 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 OVCA2Q8WZ82 227 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 FBXO32Q969P5 355 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 RNF38Q9H0F5 515 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 XYLT2Q9H1B5 865 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 BLZF1Q9H2G9 400 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 SMYD3Q9H7B4 428 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 CFAP97Q9P2B7 532 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 CGNQ9P2M7 1197 aaKnown RBP11.54□□□□□ -0.56
PFDN5-210ENST00000550513 TFIP11Q9UBB9 837 aaKnown RBP11.54□□□□□ -0.56
PFDN5-210ENST00000550513 INVSQ9Y283 1065 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 NYNRINQ9P2P1 1898 aaKnown RBP11.54□□□□□ -0.56
PFDN5-210ENST00000550513 PCDH15Q96QU1 1955 aa11.54□□□□□ -0.56
PFDN5-210ENST00000550513 USP24Q9UPU5 2620 aa11.53□□□□□ -0.56
PFDN5-210ENST00000550513 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.53□□□□□ -0.56
PFDN5-210ENST00000550513 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.53□□□□□ -0.56
PFDN5-210ENST00000550513 CLDN5O00501 218 aa11.53□□□□□ -0.56
PFDN5-210ENST00000550513 TM4SF5O14894 197 aa11.53□□□□□ -0.56
PFDN5-210ENST00000550513 POLR2DO15514 142 aaKnown RBP11.53□□□□□ -0.56
PFDN5-210ENST00000550513 EXOC3O60645 756 aa11.53□□□□□ -0.56
PFDN5-210ENST00000550513 ALDH1A2O94788 518 aa11.53□□□□□ -0.56
PFDN5-210ENST00000550513 KAT7O95251 611 aa11.53□□□□□ -0.56
PFDN5-210ENST00000550513 APODP05090 189 aa11.53□□□□□ -0.56
PFDN5-210ENST00000550513 FAM163BP0C2L3 166 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms