RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 CLDN5O00501 218 aa16.42■□□□□ 0.22
RAB5C-205ENST00000550013 OLFM2O95897 454 aa16.42■□□□□ 0.22
RAB5C-205ENST00000550013 OAS1P00973 400 aaKnown RBP16.42■□□□□ 0.22
RAB5C-205ENST00000550013 CHRM1P11229 460 aaPredicted RBP16.42■□□□□ 0.22
RAB5C-205ENST00000550013 NOVA1P51513 510 aaKnown RBP16.42■□□□□ 0.22
RAB5C-205ENST00000550013 IFRD2Q12894 506 aaPredicted RBP16.42■□□□□ 0.22
RAB5C-205ENST00000550013 TAF10Q12962 218 aa16.42■□□□□ 0.22
RAB5C-205ENST00000550013 E2F4Q16254 413 aa16.42■□□□□ 0.22
RAB5C-205ENST00000550013 SNRNP35Q16560 246 aaKnown RBP16.42■□□□□ 0.22
RAB5C-205ENST00000550013 EPM2AIP1Q7L775 607 aaPredicted RBP16.42■□□□□ 0.22
RAB5C-205ENST00000550013 CYP2U1Q7Z449 544 aa16.42■□□□□ 0.22
RAB5C-205ENST00000550013 C12orf40Q86WS4 652 aa16.42■□□□□ 0.22
RAB5C-205ENST00000550013 ADGRG2Q8IZP9 1017 aa16.42■□□□□ 0.22
RAB5C-205ENST00000550013 ALLCQ8N6M5 410 aa16.42■□□□□ 0.22
RAB5C-205ENST00000550013 OR6B3Q8NGW1 331 aa16.42■□□□□ 0.22
RAB5C-205ENST00000550013 TRIM9Q9C026 710 aa16.42■□□□□ 0.22
RAB5C-205ENST00000550013 ZNF518BQ9C0D4 1074 aa16.42■□□□□ 0.22
RAB5C-205ENST00000550013 TNMDQ9H2S6 317 aa16.42■□□□□ 0.22
RAB5C-205ENST00000550013 KIAA1586Q9HCI6 787 aa16.42■□□□□ 0.22
RAB5C-205ENST00000550013 KBTBD4Q9NVX7 518 aa16.42■□□□□ 0.22
RAB5C-205ENST00000550013 TNRC6BQ9UPQ9 1833 aaKnown RBP16.42■□□□□ 0.22
RAB5C-205ENST00000550013 ASCC3Q8N3C0 2202 aaKnown RBP16.42■□□□□ 0.22
RAB5C-205ENST00000550013 KHNYNO15037 678 aaKnown RBP16.41■□□□□ 0.22
RAB5C-205ENST00000550013 CLIC2O15247 247 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 TGFB1I1O43294 461 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 TACC1O75410 805 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 KLF8O95600 359 aaPredicted RBP16.41■□□□□ 0.22
RAB5C-205ENST00000550013 PTPN1P18031 435 aaKnown RBP16.41■□□□□ 0.22
RAB5C-205ENST00000550013 TNNI1P19237 187 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 TIE1P35590 1138 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 PI4KAP42356 2102 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 NASPP49321 788 aaPredicted RBP16.41■□□□□ 0.22
RAB5C-205ENST00000550013 DHPSP49366 369 aaPredicted RBP16.41■□□□□ 0.22
RAB5C-205ENST00000550013 CYP2J2P51589 502 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 ASIC1P78348 528 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 CYP24A1Q07973 514 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 CRY1Q16526 586 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 EMC10Q5UCC4 262 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 TDRD10Q5VZ19 366 aaKnown RBP16.41■□□□□ 0.22
RAB5C-205ENST00000550013 C11orf74Q86VG3 221 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 TXNDC5Q8NBS9 432 aaKnown RBP16.41■□□□□ 0.22
RAB5C-205ENST00000550013 ZNF507Q8TCN5 953 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 RLN3Q8WXF3 142 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 CCDC127Q96BQ5 260 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 CGRRF1Q99675 332 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 B3GNT5Q9BYG0 378 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 ZDHHC4Q9NPG8 344 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 AGPAT3Q9NRZ7 376 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 FOXD4L1Q9NU39 408 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 EHD2Q9NZN4 543 aa16.41■□□□□ 0.22
RAB5C-205ENST00000550013 IGF2RP11717 2491 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 SGK1O00141 431 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 EIF3DO15371 548 aaKnown RBP eCLIP16.4■□□□□ 0.22
RAB5C-205ENST00000550013 MBL2P11226 248 aaPredicted RBP16.4■□□□□ 0.22
RAB5C-205ENST00000550013 PPP3CCP48454 512 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 TNNC1P63316 161 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 MRPS21P82921 87 aaKnown RBP16.4■□□□□ 0.22
RAB5C-205ENST00000550013 KDSRQ06136 332 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 PSMD6Q15008 389 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 STK38Q15208 465 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 WDR72Q3MJ13 1102 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 FAM26FQ5R3K3 315 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 RHBDF2Q6PJF5 856 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 NELFCDQ8IXH7 590 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 KIAA1958Q8N8K9 716 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 IL17RCQ8NAC3 791 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 OLIG1Q8TAK6 271 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 ZNF516Q92618 1163 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 PIGKQ92643 395 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 DHX58Q96C10 678 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 FNBP1Q96RU3 617 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 PNKPQ96T60 521 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 ELOVL4Q9GZR5 314 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 GZF1Q9H116 711 aaPredicted RBP16.4■□□□□ 0.22
RAB5C-205ENST00000550013 CIZ1Q9ULV3 898 aaPredicted RBP16.4■□□□□ 0.22
RAB5C-205ENST00000550013 PLXND1Q9Y4D7 1925 aa16.4■□□□□ 0.22
RAB5C-205ENST00000550013 ZZEF1O43149 2961 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 AKAP13Q12802 2813 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 CDX4O14627 284 aaPredicted RBP16.39■□□□□ 0.21
RAB5C-205ENST00000550013 SLC9A3R1O14745 358 aaPredicted RBP16.39■□□□□ 0.21
RAB5C-205ENST00000550013 KAT7O95251 611 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 APODP05090 189 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 ADH5P11766 374 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 MYL6P60660 151 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 IRX4P78413 519 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 ZNF252P-AS1Q0IIN9 211 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 SH3PXD2AQ5TCZ1 1133 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 DAB2IPQ5VWQ8 1189 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 FRMD1Q8N878 549 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 LINC00301Q8NCQ3 95 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 B3GALNT2Q8NCR0 500 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 SCFD1Q8WVM8 642 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 SLITRK1Q96PX8 696 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 LRRC27Q9C0I9 530 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 TMEM9BQ9NQ34 198 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 ARHGEF4Q9NR80 690 aa16.39■□□□□ 0.21
RAB5C-205ENST00000550013 TFIP11Q9UBB9 837 aaKnown RBP16.39■□□□□ 0.21
RAB5C-205ENST00000550013 NXF1Q9UBU9 619 aaKnown RBP16.39■□□□□ 0.21
RAB5C-205ENST00000550013 MYH10P35580 1976 aa16.38■□□□□ 0.21
RAB5C-205ENST00000550013 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms