RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 TSG101Q99816 390 aa11.1□□□□□ -0.63
CCDC38-207ENST00000549752 GZF1Q9H116 711 aaPredicted RBP11.1□□□□□ -0.63
CCDC38-207ENST00000549752 GOLPH3LQ9H4A5 285 aa11.1□□□□□ -0.63
CCDC38-207ENST00000549752 LMAN1LQ9HAT1 526 aa11.1□□□□□ -0.63
CCDC38-207ENST00000549752 GDPD2Q9HCC8 539 aa11.1□□□□□ -0.63
CCDC38-207ENST00000549752 TRPC7Q9HCX4 862 aa11.1□□□□□ -0.63
CCDC38-207ENST00000549752 GKN1Q9NS71 199 aa11.1□□□□□ -0.63
CCDC38-207ENST00000549752 EP300Q09472 2414 aaPredicted RBP11.1□□□□□ -0.63
CCDC38-207ENST00000549752 NCANO14594 1321 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 F8VP50 259 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 CETN3O15182 167 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 HCRTO43612 131 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 EPB41P11171 864 aaKnown RBP11.09□□□□□ -0.63
CCDC38-207ENST00000549752 TCF3P15923 654 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 HDCP19113 662 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 GTF2H1P32780 548 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 CSTF1Q05048 431 aaKnown RBP11.09□□□□□ -0.63
CCDC38-207ENST00000549752 NR1H3Q13133 447 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 STIM1Q13586 685 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 RUNX3Q13761 415 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 MTF1Q14872 753 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 SCARA3Q6AZY7 606 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 ASCL5Q7RTU5 278 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 DDX42Q86XP3 938 aaKnown RBP eCLIP11.09□□□□□ -0.63
CCDC38-207ENST00000549752 NUP93Q8N1F7 819 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 SPEM1Q8N4L4 309 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 CPA6Q8N4T0 437 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 CCDC26Q8TAB7 109 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 PLEKHO2Q8TD55 490 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 OVCA2Q8WZ82 227 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 SECISBP2LQ93073 1101 aaKnown RBP11.09□□□□□ -0.63
CCDC38-207ENST00000549752 ATP2A3Q93084 1043 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 SMARCD1Q96GM5 515 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 FAXDC2Q96IV6 333 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 TIGD1Q96MW7 591 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 MED10Q9BTT4 135 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 TTLL2Q9BWV7 592 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 SMYD3Q9H7B4 428 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 CYP3A43Q9HB55 503 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 PRMT8Q9NR22 394 aaPredicted RBP11.09□□□□□ -0.63
CCDC38-207ENST00000549752 COMMD8Q9NX08 183 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 ZSCAN32Q9NX65 697 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 GTSE1Q9NYZ3 720 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 MAPK8IP1Q9UQF2 711 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 OTOGLQ3ZCN5 2332 aa11.09□□□□□ -0.63
CCDC38-207ENST00000549752 EML5Q05BV3 1969 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 GVINP1Q7Z2Y8 2422 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 TADA3O75528 432 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 VNN1O95497 513 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 ASS1P00966 412 aaKnown RBP11.08□□□□□ -0.64
CCDC38-207ENST00000549752 HLA-DRAP01903 254 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 CHRNB1P11230 501 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 CXCL12P48061 93 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 IFNAR2P48551 515 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 USP46P62068 366 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 DLG4P78352 724 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 GRSF1Q12849 480 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCDC38-207ENST00000549752 MTAPQ13126 283 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 FZD5Q13467 585 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 COBLL1Q53SF7 1204 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 ZNF658Q5TYW1 1059 aaPredicted RBP11.08□□□□□ -0.64
CCDC38-207ENST00000549752 SCARA5Q6ZMJ2 495 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 ELOA2Q8IYF1 753 aaPredicted RBP11.08□□□□□ -0.64
CCDC38-207ENST00000549752 FMR1NBQ8N0W7 255 aaPredicted RBP11.08□□□□□ -0.64
CCDC38-207ENST00000549752 ZNF687Q8N1G0 1237 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 SMARCE1Q969G3 411 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 CHAMP1Q96JM3 812 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 ZFYVE19Q96K21 471 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 LRRC3BQ96PB8 259 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 FAM83CQ9BQN1 747 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 SMG9Q9H0W8 520 aaKnown RBP11.08□□□□□ -0.64
CCDC38-207ENST00000549752 FAM124BQ9H5Z6 455 aaPredicted RBP11.08□□□□□ -0.64
CCDC38-207ENST00000549752 TMEM8AQ9HCN3 771 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 DMAP1Q9NPF5 467 aaPredicted RBP11.08□□□□□ -0.64
CCDC38-207ENST00000549752 DUS2Q9NX74 493 aaKnown RBP11.08□□□□□ -0.64
CCDC38-207ENST00000549752 ARHGAP26Q9UNA1 814 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 R4GN57 208 aa11.08□□□□□ -0.64
CCDC38-207ENST00000549752 DMDP11532 3685 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 SHISA7A6NL88 538 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 SLC9A3R1O14745 358 aaPredicted RBP11.07□□□□□ -0.64
CCDC38-207ENST00000549752 ATG13O75143 517 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 AKAP3O75969 853 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 NFATC1O95644 943 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 ABL1P00519 1130 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 DRD1P21728 446 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 YWHAQP27348 245 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 CDH8P55286 799 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 FKBP3Q00688 224 aaKnown RBP11.07□□□□□ -0.64
CCDC38-207ENST00000549752 LRRC63Q05C16 580 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 USP4Q13107 963 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 PNOCQ13519 176 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 CCDC142Q17RM4 750 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 FBXO43Q4G163 708 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 ZCWPW2Q504Y3 356 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 KRT39Q6A163 491 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 FAM35AQ86V20 835 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 MAML2Q8IZL2 1156 aaPredicted RBP11.07□□□□□ -0.64
CCDC38-207ENST00000549752 ADSSL1Q8N142 457 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 CRYBG2Q8N1P7 616 aa11.07□□□□□ -0.64
CCDC38-207ENST00000549752 ARL14EPQ8N8R7 260 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms