RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 SLC6A3Q01959 620 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 EFHC1Q5JVL4 640 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 PPP1R15BQ5SWA1 713 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 PPP2R2DQ66LE6 453 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 DCUN1D2Q6PH85 259 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 SCN4BQ8IWT1 228 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 MRPL43Q8N983 215 aaKnown RBP18.3■□□□□ 0.52
LETMD1-220ENST00000549686 ATAD1Q8NBU5 361 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 TPCN2Q8NHX9 752 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 IRGQQ8WZA9 623 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 SPATA17Q96L03 361 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 PGLYRP2Q96PD5 576 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 KCNK16Q96T55 309 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 TRIM62Q9BVG3 475 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 ALG13Q9NP73 1137 aaKnown RBP18.3■□□□□ 0.52
LETMD1-220ENST00000549686 EHD2Q9NZN4 543 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 SALL4Q9UJQ4 1053 aa18.3■□□□□ 0.52
LETMD1-220ENST00000549686 KIAA1671Q9BY89 1806 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 MYO1FO00160 1098 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 FSCN2O14926 492 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 TEX28O15482 410 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 ADAM12O43184 909 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 PAPSS1O43252 624 aaPredicted RBP18.29■□□□□ 0.52
LETMD1-220ENST00000549686 BUB1O43683 1085 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 ARHGEF15O94989 841 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 MOCS3O95396 460 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 ABL1P00519 1130 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 LCP1P13796 627 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 RPL17P18621 184 aaKnown RBP18.29■□□□□ 0.52
LETMD1-220ENST00000549686 ELF1P32519 619 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 TKTL1P51854 596 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 CACNA2D1P54289 1103 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 ADCY1Q08828 1119 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 ADIGQ0VDE8 80 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 GPM6BQ13491 265 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 MGAT5BQ3V5L5 792 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 C2CD6Q53TS8 623 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 ZNF569Q5MCW4 686 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 FAM102AQ5T9C2 384 aaPredicted RBP18.29■□□□□ 0.52
LETMD1-220ENST00000549686 C11orf63Q6NUN7 778 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 OLFML1Q6UWY5 402 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 FAM183BPQ6ZVS7 135 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 RTL10Q7L3V2 364 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 SLC26A9Q7LBE3 791 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 FNIP1Q8TF40 1166 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 C16orf45Q96MC5 204 aaPredicted RBP18.29■□□□□ 0.52
LETMD1-220ENST00000549686 RHOBTB2Q9BYZ6 727 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 NKX2-4Q9H2Z4 354 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 FBXO44Q9H4M3 255 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 SLC28A3Q9HAS3 691 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 OSGEPQ9NPF4 335 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 IP6K2Q9UHH9 426 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 COG5Q9UP83 839 aa18.29■□□□□ 0.52
LETMD1-220ENST00000549686 A0A1W2PPC1 479 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 TMEM191CA6NGB0 347 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 GOLGA8SH3BPF8 625 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 RTN3O95197 1032 aaPredicted RBP18.28■□□□□ 0.52
LETMD1-220ENST00000549686 VNN2O95498 520 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 CNPP09543 421 aaKnown RBP18.28■□□□□ 0.52
LETMD1-220ENST00000549686 DESP17661 470 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 CA8P35219 290 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 PBX2P40425 430 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 ERVFC1P60507 584 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 MRPS5P82675 430 aaKnown RBP18.28■□□□□ 0.52
LETMD1-220ENST00000549686 DUSP4Q13115 394 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 PLD1Q13393 1074 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 PM20D1Q6GTS8 502 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 SCUBE3Q8IX30 993 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 TCEAL8Q8IYN2 117 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 NUP93Q8N1F7 819 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 AUTS2Q8WXX7 1259 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 KLHL5Q96PQ7 755 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 SEPT5Q99719 369 aaPredicted RBP18.28■□□□□ 0.52
LETMD1-220ENST00000549686 TMEM30AQ9NV96 361 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 TJP2Q9UDY2 1190 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 ANAPC7Q9UJX3 599 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 MTUS1Q9ULD2 1270 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 USP3Q9Y6I4 520 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 CAPN6Q9Y6Q1 641 aa18.28■□□□□ 0.52
LETMD1-220ENST00000549686 FAM170AA1A519 330 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 GRID2IPA4D2P6 1211 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 C2orf71A6NGG8 1288 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 TNFRSF10BO14763 440 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 GRM6O15303 877 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 HSF2BPO75031 334 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 GABBR2O75899 941 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 ZBED1O96006 694 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 TNNT1P13805 278 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 MAN1A1P33908 653 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 SLC1A1P43005 524 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 SLC5A3P53794 718 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 SLFN11Q7Z7L1 901 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 DAAM2Q86T65 1068 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 MICAL1Q8TDZ2 1067 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 GOLGA1Q92805 767 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 MCEEQ96PE7 176 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 NCAPGQ9BPX3 1015 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 PRO3102Q9H379 93 aa18.27■□□□□ 0.52
LETMD1-220ENST00000549686 METTL5Q9NRN9 209 aaKnown RBP18.27■□□□□ 0.52
LETMD1-220ENST00000549686 PRRG1O14668 218 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms