RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 PDILTQ8N807 584 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 OR2I1PQ8NGU4 316 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 DPP3Q9NY33 737 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 SEL1LQ9UBV2 794 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 ZDHHC9Q9Y397 364 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 WNT6Q9Y6F9 365 aa13.08□□□□□ -0.32
DDX54-206ENST00000549271 TCHHQ07283 1943 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 MYO18BQ8IUG5 2567 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 TISP43B9A030 160 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 ARHGAP33O14559 1287 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 CUTAO60888 179 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 IL18RAPO95256 599 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 HAPLN1P10915 354 aaPredicted RBP13.07□□□□□ -0.32
DDX54-206ENST00000549271 PLA2G2AP14555 144 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 ADSSP30520 456 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 STAT6P42226 847 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 IFNAR2P48551 515 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 MRPS21P82921 87 aaKnown RBP13.07□□□□□ -0.32
DDX54-206ENST00000549271 FAM160A1Q05DH4 1040 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 TOGARAM2Q6ZUX3 1019 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 RABEPKQ7Z6M1 372 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 GLRX5Q86SX6 157 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 LRRTM3Q86VH5 581 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 TTC30AQ86WT1 665 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 MRPS31Q92665 395 aaKnown RBP13.07□□□□□ -0.32
DDX54-206ENST00000549271 PYM1Q9BRP8 204 aaKnown RBP13.07□□□□□ -0.32
DDX54-206ENST00000549271 IKZF4Q9H2S9 585 aa13.07□□□□□ -0.32
DDX54-206ENST00000549271 FRMD3A2A2Y4 597 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 KPNA7A9QM74 516 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 TADA3O75528 432 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 GAP43P17677 238 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 PNPLA4P41247 253 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 CDR1P51861 262 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 DNM1Q05193 864 aaKnown RBP13.06□□□□□ -0.32
DDX54-206ENST00000549271 KCNA1Q09470 495 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 NR1H3Q13133 447 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 BYSLQ13895 437 aaKnown RBP13.06□□□□□ -0.32
DDX54-206ENST00000549271 GAB4Q2WGN9 574 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 SV2CQ496J9 727 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 WSCD1Q658N2 575 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 ATL3Q6DD88 541 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 SLCO6A1Q86UG4 719 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 NAXDQ8IW45 347 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 SCUBE3Q8IX30 993 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 EFCAB13Q8IY85 973 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 DCP1BQ8IZD4 617 aaKnown RBP13.06□□□□□ -0.32
DDX54-206ENST00000549271 IL17RCQ8NAC3 791 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 SLC39A7Q92504 469 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 SLC22A12Q96S37 553 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 POLMQ9NP87 494 aaPredicted RBP13.06□□□□□ -0.32
DDX54-206ENST00000549271 KBTBD4Q9NVX7 518 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 TBC1D7Q9P0N9 293 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 RCOR1Q9UKL0 485 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 CIZ1Q9ULV3 898 aaPredicted RBP13.06□□□□□ -0.32
DDX54-206ENST00000549271 PCDHA7Q9UN72 937 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 APOBEC2Q9Y235 224 aaKnown RBP13.06□□□□□ -0.32
DDX54-206ENST00000549271 PCDHB9Q9Y5E1 797 aa13.06□□□□□ -0.32
DDX54-206ENST00000549271 GOLGA4Q13439 2230 aaKnown RBP13.06□□□□□ -0.32
DDX54-206ENST00000549271 MYOFQ9NZM1 2061 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 SGK1O00141 431 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 ATXN7O15265 892 aaPredicted RBP13.05□□□□□ -0.32
DDX54-206ENST00000549271 AP5Z1O43299 807 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 CBFA2T3O75081 653 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 NFE2Q16621 373 aaPredicted RBP13.05□□□□□ -0.32
DDX54-206ENST00000549271 HSF5Q4G112 596 aaPredicted RBP13.05□□□□□ -0.32
DDX54-206ENST00000549271 TMPRSS7Q7RTY8 843 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 BRSK2Q8IWQ3 736 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 ALLCQ8N6M5 410 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 SPATA18Q8TC71 538 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 LEO1Q8WVC0 666 aaPredicted RBP13.05□□□□□ -0.32
DDX54-206ENST00000549271 POMGNT1Q8WZA1 660 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 ZNF560Q96MR9 790 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 FGFBP2Q9BYJ0 223 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 LINC00597Q9H2U6 94 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 TMEM206Q9H813 350 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 MRPL44Q9H9J2 332 aaKnown RBP13.05□□□□□ -0.32
DDX54-206ENST00000549271 OLFML3Q9NRN5 406 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 KIAA1522Q9P206 1035 aaPredicted RBP13.05□□□□□ -0.32
DDX54-206ENST00000549271 EXOC7Q9UPT5 735 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 PCDHB5Q9Y5E4 795 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 RAI2Q9Y5P3 530 aa13.05□□□□□ -0.32
DDX54-206ENST00000549271 ATMQ13315 3056 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 KLF8O95600 359 aaPredicted RBP13.04□□□□□ -0.32
DDX54-206ENST00000549271 LDHAP00338 332 aaKnown RBP13.04□□□□□ -0.32
DDX54-206ENST00000549271 SYPP08247 313 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 IDEP14735 1019 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 TCF3P15923 654 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 GARTP22102 1010 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 CASP5P51878 434 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 ZNF33AQ06730 810 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 ALCAMQ13740 583 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 L1TD1Q5T7N2 865 aaKnown RBP13.04□□□□□ -0.32
DDX54-206ENST00000549271 SFTPA1Q8IWL2 248 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 LRRC52Q8N7C0 313 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 TXNDC5Q8NBS9 432 aaKnown RBP13.04□□□□□ -0.32
DDX54-206ENST00000549271 CXorf38Q8TB03 319 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 HMGB4Q8WW32 186 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 DHX58Q96C10 678 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 ACCSQ96QU6 501 aa13.04□□□□□ -0.32
DDX54-206ENST00000549271 CYP2S1Q96SQ9 504 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms