RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ISG20Q96AZ6 181 aaKnown RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 SCYL1Q96KG9 808 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 NPY6RQ99463 290 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 ARPC5LQ9BPX5 153 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 ZBED2Q9BTP6 218 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 SLC2A11Q9BYW1 496 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 R3HDMLQ9H3Y0 253 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 C11orf49Q9H6J7 331 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 APOBEC3GQ9HC16 384 aaKnown RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 CD248Q9HCU0 757 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 EPS15L1Q9UBC2 864 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 NAGPAQ9UK23 515 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 AMFRQ9UKV5 643 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 GABRQQ9UN88 632 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 MFHAS1Q9Y4C4 1052 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 KLK4Q9Y5K2 254 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 RPS6KA5O75582 802 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 PRPF6O94906 941 aaKnown RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 NDUFA10O95299 355 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 INHAP05111 366 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 ATP5BP06576 529 aaKnown RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 NOS2P35228 1153 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 TXKP42681 527 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 IFI35P80217 286 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 CDK16Q00536 496 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 PRKCZQ05513 592 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 MSLNQ13421 630 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 DHX34Q14147 1143 aaKnown RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 DMC1Q14565 340 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 LRIG3Q6UXM1 1119 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 PAQR9Q6ZVX9 377 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 ZNF296Q8WUU4 475 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 PRPF31Q8WWY3 499 aaKnown RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 LYSMD1Q96S90 227 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 AGPAT1Q99943 283 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 GDF15Q99988 308 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 TOPORSQ9NS56 1045 aaPredicted RBP5.18□□□□□ -1.58
SCAF11-212ENST00000549162 HAO1Q9UJM8 370 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 FRMD4BQ9Y2L6 1034 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 KIAA1549Q9HCM3 1950 aa5.18□□□□□ -1.58
SCAF11-212ENST00000549162 ANHXE9PGG2 379 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 TGM2P21980 687 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 SOX9P48436 509 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 PIGHQ14442 188 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-212ENST00000549162 PRKD1Q15139 912 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-212ENST00000549162 AGMOQ6ZNB7 445 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 CNTN4Q8IWV2 1026 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 CSGALNACT2Q8N6G5 542 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 RELTQ969Z4 430 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 PLD4Q96BZ4 506 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 DHX58Q96C10 678 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 AP5M1Q9H0R1 490 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 GCNT4Q9P109 453 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 FBXW11Q9UKB1 542 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 GDAQ9Y2T3 454 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-212ENST00000549162 CCDC66A2RUB6 948 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 PES1O00541 588 aaKnown RBP5.17□□□□□ -1.58
SCAF11-212ENST00000549162 DDX3XO00571 662 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCAF11-212ENST00000549162 ITGAVP06756 1048 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 STAG3L1P0CL83 205 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 CLCNKAP51800 687 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 ADARP55265 1226 aaKnown RBP5.17□□□□□ -1.58
SCAF11-212ENST00000549162 ADCY1Q08828 1119 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 ITGA7Q13683 1181 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 DPYSQ14117 519 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 ZNF658BQ4V348 819 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-212ENST00000549162 SWSAP1Q6NVH7 229 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 LRRC8DQ7L1W4 858 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 CROCCP2Q86T23 111 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 NT5DC3Q86UY8 548 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 ZDHHC14Q8IZN3 488 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 OSBPL6Q9BZF3 934 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 KCNH6Q9H252 994 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 OSGEPQ9NPF4 335 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 ST7Q9NRC1 585 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 CAPN6Q9Y6Q1 641 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 LRRK1Q38SD2 2015 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-212ENST00000549162 A0A1W2PQ67 120 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 RGSL1A5PLK6 1076 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 PP2D1A8MPX8 630 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 AGAP14A8MT82 685 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 KRIT1O00522 736 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 TP73O15350 636 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 ALDH1A2O94788 518 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 SCGB1D2O95969 90 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 CFBP00751 764 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 TCP1P17987 556 aaKnown RBP5.17□□□□□ -1.58
SCAF11-212ENST00000549162 ATP5DP30049 168 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 CYLC1P35663 651 aaPredicted RBP5.17□□□□□ -1.58
SCAF11-212ENST00000549162 OXCT1P55809 520 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 RAB15P59190 212 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 MYL7Q01449 175 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 GPR17Q13304 367 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 ADAM9Q13443 819 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 CBWD6Q4V339 395 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 C4orf48Q5BLP8 95 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 CBWD3Q5JTY5 395 aa5.17□□□□□ -1.58
SCAF11-212ENST00000549162 CBWD5Q5RIA9 395 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms