RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 NLRP12P59046 1061 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 TRIM68Q6AZZ1 485 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 SLC39A4Q6P5W5 647 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 DYMQ7RTS9 669 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 GPR155Q7Z3F1 870 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 MON1AQ86VX9 555 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 SYCP3Q8IZU3 236 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 FSIP1Q8NA03 581 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 ATP2A3Q93084 1043 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 TMX3Q96JJ7 454 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 FCRL3Q96P31 734 aaPredicted RBP9.09□□□□□ -0.95
TROAP-208ENST00000548817 DCBLD2Q96PD2 775 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 ACCSQ96QU6 501 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 CDC6Q99741 560 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 CCSER1Q9C0I3 900 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 ST6GALNAC4Q9H4F1 302 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 FAM124BQ9H5Z6 455 aaPredicted RBP9.09□□□□□ -0.95
TROAP-208ENST00000548817 MRPL44Q9H9J2 332 aaKnown RBP9.09□□□□□ -0.95
TROAP-208ENST00000548817 TRPC7Q9HCX4 862 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 BLOC1S4Q9NUP1 217 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 SUSD2Q9UGT4 822 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 PCOLCE2Q9UKZ9 415 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 AGAP1Q9UPQ3 857 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 PCDHB13Q9Y5F0 798 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 DENND4CQ5VZ89 1909 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 MGAQ8IWI9 3026 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 CEP192Q8TEP8 1941 aa9.09□□□□□ -0.95
TROAP-208ENST00000548817 TRAV19A0A0A6YYK7 116 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 ERVH48-1M5A8F1 160 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 RRP8O43159 456 aaKnown RBP9.08□□□□□ -0.96
TROAP-208ENST00000548817 WISP1O95388 367 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 F11P03951 625 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 CKMP06732 381 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 KRT19P08727 400 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 USP17L7P0C7H9 530 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 EIF2S3P41091 472 aaKnown RBP9.08□□□□□ -0.96
TROAP-208ENST00000548817 RPL6Q02878 288 aaKnown RBP9.08□□□□□ -0.96
TROAP-208ENST00000548817 SF3A1Q15459 793 aaKnown RBP9.08□□□□□ -0.96
TROAP-208ENST00000548817 EOGTQ5NDL2 527 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 RRAGBQ5VZM2 374 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 TXNDC8Q6A555 127 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 SV2BQ7L1I2 683 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 ZNF720Q7Z2F6 126 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 LRRTM3Q86VH5 581 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 SFR1Q86XK3 245 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 SPATA2LQ8IUW3 424 aaPredicted RBP9.08□□□□□ -0.96
TROAP-208ENST00000548817 TMEM86AQ8N2M4 240 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 OSCP1Q8WVF1 389 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 RLN3Q8WXF3 142 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 USP13Q92995 863 aaPredicted RBP9.08□□□□□ -0.96
TROAP-208ENST00000548817 ACBD6Q9BR61 282 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 FAM213AQ9BRX8 229 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 FSCN3Q9NQT6 498 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 DUS2Q9NX74 493 aaKnown RBP9.08□□□□□ -0.96
TROAP-208ENST00000548817 SEL1LQ9UBV2 794 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 STYXL1Q9Y6J8 313 aa9.08□□□□□ -0.96
TROAP-208ENST00000548817 MUC22E2RYF6 1773 aaPredicted RBP9.08□□□□□ -0.96
TROAP-208ENST00000548817 SPTAN1Q13813 2472 aaKnown RBP9.08□□□□□ -0.96
TROAP-208ENST00000548817 KNTC1P50748 2209 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 TISP43B9A030 160 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 K7EQS6 105 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 GCNT3O95395 438 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 ITGB3P05106 788 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 TMEM191BP0C7N4 346 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 IDEP14735 1019 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 HMGA1P17096 107 aaKnown RBP9.07□□□□□ -0.96
TROAP-208ENST00000548817 PDCP20941 246 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 ITPKBP27987 946 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 PCSK1P29120 753 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 POLR2BP30876 1174 aaKnown RBP9.07□□□□□ -0.96
TROAP-208ENST00000548817 LHX1P48742 406 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 PDE6CP51160 858 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 RBP5P82980 135 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 ZNF33AQ06730 810 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 MYO1EQ12965 1108 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 ALCAMQ13740 583 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 KCNB1Q14721 858 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 MTF1Q14872 753 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 SMAD1Q15797 465 aaKnown RBP9.07□□□□□ -0.96
TROAP-208ENST00000548817 DDR2Q16832 855 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 C2orf27AQ580R0 203 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 NAIF1Q69YI7 327 aaPredicted RBP9.07□□□□□ -0.96
TROAP-208ENST00000548817 TMEM92Q6UXU6 159 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 C4orf50Q6ZRC1 276 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 SCN4BQ8IWT1 228 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 CSGALNACT2Q8N6G5 542 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 OR2I1PQ8NGU4 316 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 BAHD1Q8TBE0 780 aaPredicted RBP9.07□□□□□ -0.96
TROAP-208ENST00000548817 LEO1Q8WVC0 666 aaPredicted RBP9.07□□□□□ -0.96
TROAP-208ENST00000548817 BAP1Q92560 729 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 NXPE2Q96DL1 559 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 TMEM206Q9H813 350 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 ABCB6Q9NP58 842 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 DDX43Q9NXZ2 648 aaKnown RBP9.07□□□□□ -0.96
TROAP-208ENST00000548817 RBAKQ9NYW8 714 aaPredicted RBP9.07□□□□□ -0.96
TROAP-208ENST00000548817 EHD2Q9NZN4 543 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 TBC1D7Q9P0N9 293 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 BCCIPQ9P287 314 aaKnown RBP eCLIP9.07□□□□□ -0.96
TROAP-208ENST00000548817 STK17AQ9UEE5 414 aa9.07□□□□□ -0.96
TROAP-208ENST00000548817 ITGA11Q9UKX5 1188 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms