RNA–Protein interactions for RNA: ENST00000548132.1

GCN1-204, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-204ENST00000548132 A8MXQ7 604 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 SCAMP3O14828 347 aaKnown RBP13.24□□□□□ -0.29
GCN1-204ENST00000548132 RNF40O75150 1001 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 BEST1O76090 585 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 HLA-DRAP01903 254 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 GRIK1P39086 918 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 OPRD1P41143 372 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 CXCL12P48061 93 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 SLC5A3P53794 718 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 INCA1Q0VD86 236 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 TRPC3Q13507 836 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 KCNB1Q14721 858 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 LPAL2Q16609 132 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 ZNF667Q5HYK9 610 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 GPRIN1Q7Z2K8 1008 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 SFTPA1Q8IWL2 248 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 SCAMP5Q8TAC9 235 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 TAS1R2Q8TE23 839 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 ATRIPQ8WXE1 791 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 WBP2Q969T9 261 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 KCNK16Q96T55 309 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 SMOQ99835 787 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 KRT82Q9NSB4 513 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 IL37Q9NZH6 218 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 MAPK8IP1Q9UQF2 711 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 SDK1Q7Z5N4 2213 aa13.24□□□□□ -0.29
GCN1-204ENST00000548132 MYO18AQ92614 2054 aaKnown RBP13.24□□□□□ -0.29
GCN1-204ENST00000548132 NYNRINQ9P2P1 1898 aaKnown RBP13.23□□□□□ -0.29
GCN1-204ENST00000548132 CEP295Q9C0D2 2601 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 LEFTY2O00292 366 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 MAPK13O15264 365 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 HRO43593 1189 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 ZDHHC11BP0C7U3 371 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 NR2F2P24468 414 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 HOXA6P31267 233 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 ID4P47928 161 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 AP3M2P53677 418 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 TAF10Q12962 218 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 C12orf40Q86WS4 652 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 ZC3H3Q8IXZ2 948 aaKnown RBP13.23□□□□□ -0.29
GCN1-204ENST00000548132 FMR1NBQ8N0W7 255 aaPredicted RBP13.23□□□□□ -0.29
GCN1-204ENST00000548132 SYNPOQ8N3V7 929 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 GUF1Q8N442 669 aaKnown RBP13.23□□□□□ -0.29
GCN1-204ENST00000548132 CPA6Q8N4T0 437 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 WHAMMQ8TF30 809 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 LINC00597Q9H2U6 94 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 THG1LQ9NWX6 298 aaKnown RBP13.23□□□□□ -0.29
GCN1-204ENST00000548132 DUS2Q9NX74 493 aaKnown RBP13.23□□□□□ -0.29
GCN1-204ENST00000548132 DLL3Q9NYJ7 618 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 CPQQ9Y646 472 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 KMT2BQ9UMN6 2715 aaPredicted RBP13.23□□□□□ -0.29
GCN1-204ENST00000548132 EPG5Q9HCE0 2579 aa13.23□□□□□ -0.29
GCN1-204ENST00000548132 CEP192Q8TEP8 1941 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 HHLA1C9JL84 531 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 PFKLP17858 780 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 ANXA13P27216 316 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 PIK3CAP42336 1068 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 IFNAR2P48551 515 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 NDST1P52848 882 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 IFRD2Q12894 506 aaPredicted RBP13.22□□□□□ -0.29
GCN1-204ENST00000548132 PNOCQ13519 176 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 CEP135Q66GS9 1140 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 HEATR6Q6AI08 1181 aaKnown RBP13.22□□□□□ -0.29
GCN1-204ENST00000548132 FILIP1Q7Z7B0 1213 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 ACOT1Q86TX2 421 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 WDR5BQ86VZ2 330 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 LONP2Q86WA8 852 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 PHTF2Q8N3S3 785 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 ENGASEQ8NFI3 743 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 SLC2A14Q8TDB8 520 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 ATP2A3Q93084 1043 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 SMARCD1Q96GM5 515 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 P2RY13Q9BPV8 354 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 HINFPQ9BQA5 517 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 SCAND2PQ9GZW5 306 aaPredicted RBP13.22□□□□□ -0.29
GCN1-204ENST00000548132 CSNK1G1Q9HCP0 422 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 DMAP1Q9NPF5 467 aaPredicted RBP13.22□□□□□ -0.29
GCN1-204ENST00000548132 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.22□□□□□ -0.295e-6■■■■□ 23.6
GCN1-204ENST00000548132 FAM49BQ9NUQ9 324 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 SMPD4Q9NXE4 827 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 TRPM5Q9NZQ8 1165 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 GMIPQ9P107 970 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 NCDNQ9UBB6 729 aa13.22□□□□□ -0.29
GCN1-204ENST00000548132 R3HCC1Q9Y3T6 440 aaKnown RBP13.22□□□□□ -0.29
GCN1-204ENST00000548132 CNOT1A5YKK6 2376 aaKnown RBP13.21□□□□□ -0.29
GCN1-204ENST00000548132 MED19A0JLT2 244 aaPredicted RBP13.21□□□□□ -0.29
GCN1-204ENST00000548132 COCHO43405 550 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 GREM1O60565 184 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 PHACTR2O75167 634 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 ZNF202O95125 648 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 HNRNPLP14866 589 aaKnown RBP eCLIP13.21□□□□□ -0.29
GCN1-204ENST00000548132 HDCP19113 662 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 GCLMP48507 274 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 PXNP49023 591 aaPredicted RBP13.21□□□□□ -0.29
GCN1-204ENST00000548132 GALK1P51570 392 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 VAMP7P51809 220 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 SNX30Q5VWJ9 437 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 LAIR1Q6GTX8 287 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 CLEC20AQ6ZU45 233 aa13.21□□□□□ -0.29
GCN1-204ENST00000548132 C12orf29Q8N999 325 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms