RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 VPS53Q5VIR6 699 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 KLHDC7AQ5VTJ3 777 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 ICE2Q659A1 982 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 FOXR2Q6PJQ5 311 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 C4orf50Q6ZRC1 276 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 RSPH3Q86UC2 560 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 SH2D3CQ8N5H7 860 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 BRIX1Q8TDN6 353 aaKnown RBP4.91□□□□□ -1.62
SCAF11-210ENST00000547654 HDAC2Q92769 488 aaKnown RBP4.91□□□□□ -1.62
SCAF11-210ENST00000547654 RAB24Q969Q5 203 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 IQCDQ96DY2 449 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 STK33Q9BYT3 514 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 SERHLQ9NQF3 203 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 ITM2CQ9NQX7 267 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 TMEM140Q9NV12 185 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 ASB6Q9NWX5 421 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 FOXJ2Q9P0K8 574 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 CTTNBP2NLQ9P2B4 639 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 ABCF2Q9UG63 623 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 AFF4Q9UHB7 1163 aaKnown RBP4.91□□□□□ -1.62
SCAF11-210ENST00000547654 KCNE5Q9UJ90 142 aa4.91□□□□□ -1.62
SCAF11-210ENST00000547654 MTO1Q9Y2Z2 717 aaKnown RBP4.91□□□□□ -1.62
SCAF11-210ENST00000547654 KIF21AQ7Z4S6 1674 aa4.9□□□□□ -1.62
SCAF11-210ENST00000547654 LRRC14BA6NHZ5 514 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 SYT5O00445 386 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 ACKR2O00590 384 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 TEX33O43247 280 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 SLC43A1O75387 559 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 BAIAP3O94812 1187 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 GPANK1O95872 356 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 FCER1AP12319 257 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 ELF1P32519 619 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 COPB2P35606 906 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 NKX6-1P78426 367 aaPredicted RBP4.9□□□□□ -1.63
SCAF11-210ENST00000547654 HSD11B2P80365 405 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 MPP1Q00013 466 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 FMO1Q01740 532 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 PLS1Q14651 629 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 TAF5Q15542 800 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 KIAA0895LQ68EN5 471 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 FBXO38Q6PIJ6 1188 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 GADL1Q6ZQY3 521 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 BEND5Q7L4P6 421 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 GALNT15Q8N3T1 639 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 RNF152Q8N8N0 203 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 NUP133Q8WUM0 1156 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 ZBTB10Q96DT7 871 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 PTCD3Q96EY7 689 aaKnown RBP4.9□□□□□ -1.63
SCAF11-210ENST00000547654 MARS2Q96GW9 593 aaKnown RBP4.9□□□□□ -1.63
SCAF11-210ENST00000547654 PDLIM2Q96JY6 352 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 CLPTM1LQ96KA5 538 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 MSLNLQ96KJ4 702 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 UHRF1Q96T88 793 aaPredicted RBP4.9□□□□□ -1.63
SCAF11-210ENST00000547654 BRIP1Q9BX63 1249 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 GSTO2Q9H4Y5 243 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 MANSC1Q9H8J5 431 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 UNKLQ9H9P5 680 aaKnown RBP4.9□□□□□ -1.63
SCAF11-210ENST00000547654 PNPOQ9NVS9 261 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 PIH1D1Q9NWS0 290 aaKnown RBP4.9□□□□□ -1.63
SCAF11-210ENST00000547654 SLC39A10Q9ULF5 831 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 TMEM98Q9Y2Y6 226 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 PCDHA3Q9Y5H8 950 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 ARHGEF11O15085 1522 aa4.9□□□□□ -1.63
SCAF11-210ENST00000547654 ARHGEF17Q96PE2 2063 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-210ENST00000547654 MYO1FO00160 1098 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 HNRNPDLO14979 420 aaKnown RBP4.89□□□□□ -1.63
SCAF11-210ENST00000547654 ORC4O43929 436 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 PLA2G6O60733 806 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 CD4P01730 458 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 TYRP14679 529 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 VEGFAP15692 232 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-210ENST00000547654 CAPN3P20807 821 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 ITGA8P53708 1063 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 SUMO3P55854 103 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-210ENST00000547654 PER3P56645 1201 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 PRKG2Q13237 762 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 RAB39AQ14964 217 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 ANKRD45Q5TZF3 282 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 SESTD1Q86VW0 696 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 LNX2Q8N448 690 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 ATP11CQ8NB49 1132 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 NGDNQ8NEJ9 315 aaKnown RBP4.89□□□□□ -1.63
SCAF11-210ENST00000547654 SLC30A5Q8TAD4 765 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 FAM167BQ9BTA0 163 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 SORBS1Q9BX66 1292 aaKnown RBP4.89□□□□□ -1.63
SCAF11-210ENST00000547654 TLR10Q9BXR5 811 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 EIF2AQ9BY44 585 aaKnown RBP4.89□□□□□ -1.63
SCAF11-210ENST00000547654 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.89□□□□□ -1.63
SCAF11-210ENST00000547654 C11orf54Q9H0W9 315 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-210ENST00000547654 OBP2BQ9NPH6 170 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 VPS45Q9NRW7 570 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 SACM1LQ9NTJ5 587 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 KCTD5Q9NXV2 234 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 IFT80Q9P2H3 777 aaPredicted RBP4.89□□□□□ -1.63
SCAF11-210ENST00000547654 CPNE7Q9UBL6 633 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 RUVBL1Q9Y265 456 aaKnown RBP4.89□□□□□ -1.63
SCAF11-210ENST00000547654 USP19O94966 1318 aa4.89□□□□□ -1.63
SCAF11-210ENST00000547654 LGALS16A8MUM7 142 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 F8W8V4 182 aa4.88□□□□□ -1.63
SCAF11-210ENST00000547654 K7ENM7 598 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms