RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 RABGEF1Q9UJ41 708 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 ZMYND8Q9ULU4 1186 aaPredicted RBP16.24■□□□□ 0.19
BRF1-212ENST00000547562 TCRBV7S3A2A0A539 114 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 PDHXO00330 501 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 STRNO43815 780 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 TMEM63AO94886 807 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 ASMTLO95671 621 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 TAC1P20366 129 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 FOXN2P32314 431 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 PHBP35232 272 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 GEMIN4P57678 1058 aaKnown RBP16.24■□□□□ 0.19
BRF1-212ENST00000547562 GOLGA7BQ2TAP0 167 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 RAB6CQ53S08 254 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 DPY19L2Q6NUT2 758 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 FUKQ8N0W3 1084 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 PLCD3Q8N3E9 789 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 DENND1AQ8TEH3 1009 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 SMC6Q96SB8 1091 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 WDR83Q9BRX9 315 aaKnown RBP16.24■□□□□ 0.19
BRF1-212ENST00000547562 RAB6CQ9H0N0 254 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 FETUBQ9UGM5 382 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 SMG5Q9UPR3 1016 aaKnown RBP16.24■□□□□ 0.19
BRF1-212ENST00000547562 ARL2BPQ9Y2Y0 163 aa16.24■□□□□ 0.19
BRF1-212ENST00000547562 PRPSAP2O60256 369 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 GRAP2O75791 330 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 SSTR1P30872 391 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 ROR1Q01973 937 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 DPYSL3Q14195 570 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 NOMO1Q15155 1222 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 DCAF4L1Q3SXM0 396 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 TAB3Q8N5C8 712 aaPredicted RBP16.23■□□□□ 0.19
BRF1-212ENST00000547562 PLCD4Q9BRC7 762 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 XPO7Q9UIA9 1087 aaKnown RBP16.23■□□□□ 0.19
BRF1-212ENST00000547562 MMP3P08254 477 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 HOXD8P13378 290 aaPredicted RBP16.23■□□□□ 0.19
BRF1-212ENST00000547562 STIP1P31948 543 aaKnown RBP16.23■□□□□ 0.19
BRF1-212ENST00000547562 TFDP2Q14188 446 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 MTFR1Q15390 333 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 CDO1Q16878 200 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 FAM133BQ5BKY9 247 aaKnown RBP16.23■□□□□ 0.19
BRF1-212ENST00000547562 FAM47CQ5HY64 1035 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 PPP1R26Q5T8A7 1209 aaPredicted RBP16.23■□□□□ 0.19
BRF1-212ENST00000547562 CGB2Q6NT52 195 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 NPNTQ6UXI9 565 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 PDIK1LQ8N165 341 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 FBXO36Q8NEA4 188 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 MRRFQ96E11 262 aaKnown RBP16.23■□□□□ 0.19
BRF1-212ENST00000547562 PAIP2Q9BPZ3 127 aaKnown RBP16.23■□□□□ 0.19
BRF1-212ENST00000547562 CXCL16Q9H2A7 254 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 PLEKHA5Q9HAU0 1116 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 PRKAG3Q9UGI9 489 aa16.23■□□□□ 0.19
BRF1-212ENST00000547562 NPTXRO95502 500 aa16.22■□□□□ 0.19
BRF1-212ENST00000547562 SMPD1P17405 629 aa16.22■□□□□ 0.19
BRF1-212ENST00000547562 RGS7P49802 495 aa16.22■□□□□ 0.19
BRF1-212ENST00000547562 BASP1P80723 227 aaKnown RBP16.22■□□□□ 0.19
BRF1-212ENST00000547562 KIZQ2M2Z5 673 aa16.22■□□□□ 0.19
BRF1-212ENST00000547562 CCDC14Q49A88 953 aa16.22■□□□□ 0.19
BRF1-212ENST00000547562 PKDCCQ504Y2 493 aa16.22■□□□□ 0.19
BRF1-212ENST00000547562 PMF1Q6P1K2 205 aa16.22■□□□□ 0.19
BRF1-212ENST00000547562 CYB5D1Q6P9G0 228 aa16.22■□□□□ 0.19
BRF1-212ENST00000547562 DARS2Q6PI48 645 aaKnown RBP16.22■□□□□ 0.19
BRF1-212ENST00000547562 OLFML1Q6UWY5 402 aa16.22■□□□□ 0.19
BRF1-212ENST00000547562 C3orf62Q6ZUJ4 267 aa16.22■□□□□ 0.19
BRF1-212ENST00000547562 C4orf33Q8N1A6 199 aa16.22■□□□□ 0.19
BRF1-212ENST00000547562 GRAMD1AQ96CP6 724 aa16.22■□□□□ 0.19
BRF1-212ENST00000547562 MRPL45Q9BRJ2 306 aaKnown RBP16.22■□□□□ 0.19
BRF1-212ENST00000547562 ACSS3Q9H6R3 686 aa16.22■□□□□ 0.19
BRF1-212ENST00000547562 DERAQ9Y315 318 aa16.22■□□□□ 0.19
BRF1-212ENST00000547562 DPYSL4O14531 572 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 UBOX5O94941 541 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 NRLP54845 237 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 SPARCL1Q14515 664 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 DUSP28Q4G0W2 176 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 ICE2Q659A1 982 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 ZC3H18Q86VM9 953 aaKnown RBP16.21■□□□□ 0.19
BRF1-212ENST00000547562 RNF157Q96PX1 679 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 PITPNM3Q9BZ71 974 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 SLC45A1Q9Y2W3 748 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 SNX9Q9Y5X1 595 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 PDCD11Q14690 1871 aaKnown RBP16.21■□□□□ 0.19
BRF1-212ENST00000547562 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.21■□□□□ 0.19
BRF1-212ENST00000547562 A0A1W2PPM1 405 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 BTBD19C9JJ37 291 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 HOXA11P31270 313 aaPredicted RBP16.21■□□□□ 0.19
BRF1-212ENST00000547562 RPA3P35244 121 aaPredicted RBP16.21■□□□□ 0.19
BRF1-212ENST00000547562 ATP11AP98196 1134 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 RNASELQ05823 741 aaKnown RBP16.21■□□□□ 0.19
BRF1-212ENST00000547562 KRT81Q14533 505 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 EFTUD2Q15029 972 aaKnown RBP eCLIP16.21■□□□□ 0.197e-8■■■■■ 54.9
BRF1-212ENST00000547562 KLHL38Q2WGJ6 581 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 BBS9Q3SYG4 887 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 ACOT1Q86TX2 421 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 TTC30AQ86WT1 665 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 MAP7D3Q8IWC1 876 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 GBP7Q8N8V2 638 aaPredicted RBP16.21■□□□□ 0.19
BRF1-212ENST00000547562 FBF1Q8TES7 1133 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 ZMAT2Q96NC0 199 aaKnown RBP16.21■□□□□ 0.19
BRF1-212ENST00000547562 DHRS4Q9BTZ2 278 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 SPON1Q9HCB6 807 aa16.21■□□□□ 0.19
BRF1-212ENST00000547562 SNTG2Q9NY99 539 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms