RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 SLC9A3R1O14745 358 aaPredicted RBP17.79■□□□□ 0.44
CPSF7-225ENST00000545934 TNFRSF10BO14763 440 aa17.79■□□□□ 0.44
CPSF7-225ENST00000545934 TRIM66O15016 1216 aa17.79■□□□□ 0.44
CPSF7-225ENST00000545934 PRPF6O94906 941 aaKnown RBP17.79■□□□□ 0.44
CPSF7-225ENST00000545934 SPINK2P20155 84 aa17.79■□□□□ 0.44
CPSF7-225ENST00000545934 DHPSP49366 369 aaPredicted RBP17.79■□□□□ 0.44
CPSF7-225ENST00000545934 CYP27A1Q02318 531 aa17.79■□□□□ 0.44
CPSF7-225ENST00000545934 SPDYCQ5MJ68 293 aa17.79■□□□□ 0.44
CPSF7-225ENST00000545934 RHBDF2Q6PJF5 856 aa17.79■□□□□ 0.44
CPSF7-225ENST00000545934 C12orf40Q86WS4 652 aa17.79■□□□□ 0.44
CPSF7-225ENST00000545934 ALLCQ8N6M5 410 aa17.79■□□□□ 0.44
CPSF7-225ENST00000545934 FRMD1Q8N878 549 aa17.79■□□□□ 0.44
CPSF7-225ENST00000545934 TXNDC5Q8NBS9 432 aaKnown RBP17.79■□□□□ 0.44
CPSF7-225ENST00000545934 PIGKQ92643 395 aa17.79■□□□□ 0.44
CPSF7-225ENST00000545934 CLIC6Q96NY7 704 aa17.79■□□□□ 0.44
CPSF7-225ENST00000545934 PNKPQ96T60 521 aa17.79■□□□□ 0.44
CPSF7-225ENST00000545934 PANK4Q9NVE7 773 aa17.79■□□□□ 0.44
CPSF7-225ENST00000545934 MBD1Q9UIS9 605 aaPredicted RBP17.79■□□□□ 0.44
CPSF7-225ENST00000545934 CPQQ9Y646 472 aa17.79■□□□□ 0.44
CPSF7-225ENST00000545934 MORC2Q9Y6X9 1032 aaPredicted RBP17.79■□□□□ 0.44
CPSF7-225ENST00000545934 A0A087X0B3 334 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 TMEM8BA6NDV4 472 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 F8VP50 259 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 ADAM23O75077 832 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 KAT7O95251 611 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 TNNC2P02585 160 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 PDGFRBP09619 1106 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 FAM163BP0C2L3 166 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 IDEP14735 1019 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 ANXA13P27216 316 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 HOXD13P35453 343 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 CACNA2D1P54289 1103 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 SURF1Q15526 300 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 DUOXA2Q1HG44 320 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 MAP7D1Q3KQU3 841 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 CBWD2Q8IUF1 395 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 WDR49Q8IV35 697 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 RLN3Q8WXF3 142 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 SCNM1Q9BWG6 230 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 TMEM74BQ9NUR3 256 aa17.78■□□□□ 0.44
CPSF7-225ENST00000545934 ZNF233A6NK53 670 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 TULP1O00294 542 aaPredicted RBP17.77■□□□□ 0.44
CPSF7-225ENST00000545934 TACC1O75410 805 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 ALDH1A2O94788 518 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 KLF8O95600 359 aaPredicted RBP17.77■□□□□ 0.44
CPSF7-225ENST00000545934 TIE1P35590 1138 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 PTGER3P43115 390 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 TNFRSF4P43489 277 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 LMAN2Q12907 356 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 TAF10Q12962 218 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 TRIM61Q5EBN2 209 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 MDH1BQ5I0G3 518 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 EMC10Q5UCC4 262 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 SLC23A3Q6PIS1 610 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 CCDC73Q6ZRK6 1079 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 LPCAT2Q7L5N7 544 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 TRAPPC11Q7Z392 1133 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 SYT12Q8IV01 421 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 GLIS3Q8NEA6 775 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 DEFB124Q8NES8 71 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 WHAMMQ8TF30 809 aa17.77■□□□□ 0.44
CPSF7-225ENST00000545934 MRPL45Q9BRJ2 306 aaKnown RBP17.77■□□□□ 0.44
CPSF7-225ENST00000545934 POLMQ9NP87 494 aaPredicted RBP17.77■□□□□ 0.44
CPSF7-225ENST00000545934 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.76■□□□□ 0.43
CPSF7-225ENST00000545934 CST3P01034 146 aaPredicted RBP17.76■□□□□ 0.43
CPSF7-225ENST00000545934 APODP05090 189 aa17.76■□□□□ 0.43
CPSF7-225ENST00000545934 TXLNAP40222 546 aa17.76■□□□□ 0.43
CPSF7-225ENST00000545934 EOGTQ5NDL2 527 aa17.76■□□□□ 0.43
CPSF7-225ENST00000545934 PIP4P1Q86T03 277 aa17.76■□□□□ 0.43
CPSF7-225ENST00000545934 DDX42Q86XP3 938 aaKnown RBP eCLIP17.76■□□□□ 0.43
CPSF7-225ENST00000545934 ETFBKMTQ8IXQ9 262 aa17.76■□□□□ 0.43
CPSF7-225ENST00000545934 TMEFF1Q8IYR6 380 aa17.76■□□□□ 0.43
CPSF7-225ENST00000545934 NOC3LQ8WTT2 800 aaKnown RBP17.76■□□□□ 0.43
CPSF7-225ENST00000545934 ZFRQ96KR1 1074 aaKnown RBP17.76■□□□□ 0.43
CPSF7-225ENST00000545934 SPACA7Q96KW9 195 aa17.76■□□□□ 0.43
CPSF7-225ENST00000545934 DUSP9Q99956 384 aaKnown RBP17.76■□□□□ 0.43
CPSF7-225ENST00000545934 SMPD4Q9NXE4 827 aa17.76■□□□□ 0.43
CPSF7-225ENST00000545934 HSPBP1Q9NZL4 362 aa17.76■□□□□ 0.43
CPSF7-225ENST00000545934 CFAP97Q9P2B7 532 aa17.76■□□□□ 0.43
CPSF7-225ENST00000545934 PILRBQ9UKJ0 227 aa17.76■□□□□ 0.43
CPSF7-225ENST00000545934 R3HCC1Q9Y3T6 440 aaKnown RBP17.76■□□□□ 0.43
CPSF7-225ENST00000545934 IGF2RP11717 2491 aa17.76■□□□□ 0.43
CPSF7-225ENST00000545934 E2F8A0AVK6 867 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 UPK3BL1B0FP48 263 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 UPK3BL2E5RIL1 263 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 SCAMP3O14828 347 aaKnown RBP17.75■□□□□ 0.43
CPSF7-225ENST00000545934 ADH1CP00326 375 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 ADH5P11766 374 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 ENGP17813 658 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 HOXD12P35452 270 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 GNL1P36915 607 aaPredicted RBP17.75■□□□□ 0.43
CPSF7-225ENST00000545934 STAT6P42226 847 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 GRIA2P42262 883 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 DPP6P42658 865 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 RESTQ13127 1097 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 SEMA3BQ13214 749 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 CUL4AQ13619 759 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 UAP1L1Q3KQV9 507 aa17.75■□□□□ 0.43
CPSF7-225ENST00000545934 TDRD10Q5VZ19 366 aaKnown RBP17.75■□□□□ 0.43
CPSF7-225ENST00000545934 ELOVL4Q9GZR5 314 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms