RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 CACNA2D1P54289 1103 aa21.12■□□□□ 0.97
CHD4-213ENST00000545584 HEATR6Q6AI08 1181 aaKnown RBP21.12■□□□□ 0.97
CHD4-213ENST00000545584 FAM35AQ86V20 835 aa21.12■□□□□ 0.97
CHD4-213ENST00000545584 LONP2Q86WA8 852 aa21.12■□□□□ 0.97
CHD4-213ENST00000545584 PDZD8Q8NEN9 1154 aa21.12■□□□□ 0.97
CHD4-213ENST00000545584 ELMO3Q96BJ8 720 aa21.12■□□□□ 0.97
CHD4-213ENST00000545584 DMAP1Q9NPF5 467 aaPredicted RBP21.12■□□□□ 0.97
CHD4-213ENST00000545584 K7ESF4 209 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 LEFTY2O00292 366 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 NFATC1O95644 943 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 ASS1P00966 412 aaKnown RBP21.11■□□□□ 0.97
CHD4-213ENST00000545584 HLA-DRAP01903 254 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 PSMC2P35998 433 aaKnown RBP21.11■□□□□ 0.97
CHD4-213ENST00000545584 SLC7A9P82251 487 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 ADAM9Q13443 819 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 EML3Q32P44 896 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 FBXO43Q4G163 708 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 PRR23BQ6ZRT6 265 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 ACOT1Q86TX2 421 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 UNC93AQ86WB7 457 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 FAM186BQ8IYM0 893 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 CCDC150Q8NCX0 1101 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 OVCA2Q8WZ82 227 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 CD101Q93033 1021 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 FBXO32Q969P5 355 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 SDCBP2Q9H190 292 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 TMEM30AQ9NV96 361 aa21.11■□□□□ 0.97
CHD4-213ENST00000545584 GPR179Q6PRD1 2367 aa21.1■□□□□ 0.97
CHD4-213ENST00000545584 SPTBN4Q9H254 2564 aa21.1■□□□□ 0.97
CHD4-213ENST00000545584 AKAP3O75969 853 aa21.1■□□□□ 0.97
CHD4-213ENST00000545584 EGFP01133 1207 aa21.1■□□□□ 0.97
CHD4-213ENST00000545584 HOXA6P31267 233 aa21.1■□□□□ 0.97
CHD4-213ENST00000545584 ENPEPQ07075 957 aa21.1■□□□□ 0.97
CHD4-213ENST00000545584 SIM2Q14190 667 aaPredicted RBP21.1■□□□□ 0.97
CHD4-213ENST00000545584 KIAA1958Q8N8K9 716 aa21.1■□□□□ 0.97
CHD4-213ENST00000545584 CHFRQ96EP1 664 aa21.1■□□□□ 0.97
CHD4-213ENST00000545584 KCNK16Q96T55 309 aa21.1■□□□□ 0.97
CHD4-213ENST00000545584 DNAI2Q9GZS0 605 aa21.1■□□□□ 0.97
CHD4-213ENST00000545584 SLC8A2Q9UPR5 921 aa21.1■□□□□ 0.97
CHD4-213ENST00000545584 CPQQ9Y646 472 aa21.1■□□□□ 0.97
CHD4-213ENST00000545584 SLC9A3R1O14745 358 aaPredicted RBP21.09■□□□□ 0.97
CHD4-213ENST00000545584 RNF40O75150 1001 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 AP1G2O75843 785 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 OLFM2O95897 454 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 OAS1P00973 400 aaKnown RBP21.09■□□□□ 0.97
CHD4-213ENST00000545584 MBL2P11226 248 aaPredicted RBP21.09■□□□□ 0.97
CHD4-213ENST00000545584 GCLMP48507 274 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 NDST1P52848 882 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 NUCB2P80303 420 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 FOXK2Q01167 660 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 DMWDQ09019 674 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 LPAL2Q16609 132 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 C1orf220Q5T0J3 134 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 LAIR1Q6GTX8 287 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 SPOPLQ6IQ16 392 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 DDX42Q86XP3 938 aaKnown RBP eCLIP21.09■□□□□ 0.97
CHD4-213ENST00000545584 CRYBG2Q8N1P7 616 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 CCDC26Q8TAB7 109 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 RNF38Q9H0F5 515 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 LINC00597Q9H2U6 94 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 MMRN2Q9H8L6 949 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 KRT82Q9NSB4 513 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 RMND1Q9NWS8 449 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 C2orf42Q9NWW7 574 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 COMMD8Q9NX08 183 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 SMPD4Q9NXE4 827 aa21.09■□□□□ 0.97
CHD4-213ENST00000545584 HELZP42694 1942 aaKnown RBP21.08■□□□□ 0.97
CHD4-213ENST00000545584 TRIM49P0CI25 452 aa21.08■□□□□ 0.97
CHD4-213ENST00000545584 TRIM49CP0CI26 452 aa21.08■□□□□ 0.97
CHD4-213ENST00000545584 ASPAP45381 313 aa21.08■□□□□ 0.97
CHD4-213ENST00000545584 SLC5A3P53794 718 aa21.08■□□□□ 0.97
CHD4-213ENST00000545584 EDRF1Q3B7T1 1238 aa21.08■□□□□ 0.97
CHD4-213ENST00000545584 PAQR9Q6ZVX9 377 aa21.08■□□□□ 0.97
CHD4-213ENST00000545584 CEP68Q76N32 757 aa21.08■□□□□ 0.97
CHD4-213ENST00000545584 ERMP1Q7Z2K6 904 aa21.08■□□□□ 0.97
CHD4-213ENST00000545584 FUKQ8N0W3 1084 aa21.08■□□□□ 0.97
CHD4-213ENST00000545584 CYP3A43Q9HB55 503 aa21.08■□□□□ 0.97
CHD4-213ENST00000545584 FBRSL1Q9HCM7 1045 aaKnown RBP21.08■□□□□ 0.97
CHD4-213ENST00000545584 ZNF292O60281 2723 aa21.08■□□□□ 0.96
CHD4-213ENST00000545584 HRO43593 1189 aa21.07■□□□□ 0.96
CHD4-213ENST00000545584 CCDC130P13994 396 aa21.07■□□□□ 0.96
CHD4-213ENST00000545584 ZXDBP98169 803 aa21.07■□□□□ 0.96
CHD4-213ENST00000545584 ORC1Q13415 861 aa21.07■□□□□ 0.96
CHD4-213ENST00000545584 HECTD3Q5T447 861 aa21.07■□□□□ 0.96
CHD4-213ENST00000545584 PKN3Q6P5Z2 889 aa21.07■□□□□ 0.96
CHD4-213ENST00000545584 FILIP1Q7Z7B0 1213 aa21.07■□□□□ 0.96
CHD4-213ENST00000545584 WDR5BQ86VZ2 330 aa21.07■□□□□ 0.96
CHD4-213ENST00000545584 SCAMP5Q8TAC9 235 aa21.07■□□□□ 0.96
CHD4-213ENST00000545584 SLC2A14Q8TDB8 520 aa21.07■□□□□ 0.96
CHD4-213ENST00000545584 FBXO44Q9H4M3 255 aa21.07■□□□□ 0.96
CHD4-213ENST00000545584 TMEM8AQ9HCN3 771 aa21.07■□□□□ 0.96
CHD4-213ENST00000545584 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.07■□□□□ 0.962e-11■■■■■ 90.7
CHD4-213ENST00000545584 CFAP97Q9P2B7 532 aa21.07■□□□□ 0.96
CHD4-213ENST00000545584 CHORDC1Q9UHD1 332 aaPredicted RBP21.07■□□□□ 0.96
CHD4-213ENST00000545584 USP18Q9UMW8 372 aa21.07■□□□□ 0.96
CHD4-213ENST00000545584 CETN3O15182 167 aa21.06■□□□□ 0.96
CHD4-213ENST00000545584 GTF2H1P32780 548 aa21.06■□□□□ 0.96
CHD4-213ENST00000545584 PPP3CAQ08209 521 aa21.06■□□□□ 0.96
CHD4-213ENST00000545584 PNOCQ13519 176 aa21.06■□□□□ 0.96
CHD4-213ENST00000545584 ZCWPW2Q504Y3 356 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms