RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 TMEM102Q8N9M5 508 aaPredicted RBP8.26□□□□□ -1.09
SNHG1-223ENST00000545440 ZSWIM2Q8NEG5 633 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 OR10T2Q8NGX3 314 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 ITFG1Q8TB96 612 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 SPATA18Q8TC71 538 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 ZNF507Q8TCN5 953 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 C2orf15Q8WU43 125 aaKnown RBP8.26□□□□□ -1.09
SNHG1-223ENST00000545440 CACTINQ8WUQ7 758 aaKnown RBP8.26□□□□□ -1.09
SNHG1-223ENST00000545440 SCFD1Q8WVM8 642 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 RSAD2Q8WXG1 361 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 HPS3Q969F9 1004 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 SCAND2PQ9GZW5 306 aaPredicted RBP8.26□□□□□ -1.09
SNHG1-223ENST00000545440 KIAA1586Q9HCI6 787 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 ASAH2Q9NR71 780 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 SLC2A4RGQ9NR83 387 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 ENAMQ9NRM1 1142 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 METTL5Q9NRN9 209 aaKnown RBP8.26□□□□□ -1.09
SNHG1-223ENST00000545440 AGPAT3Q9NRZ7 376 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 GDE1Q9NZC3 331 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 HSPBP1Q9NZL4 362 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 FRRS1LQ9P0K9 344 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 CGNQ9P2M7 1197 aaKnown RBP8.26□□□□□ -1.09
SNHG1-223ENST00000545440 WNT16Q9UBV4 365 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 FBXL21Q9UKT6 434 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 HPSEQ9Y251 543 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 MRPS23Q9Y3D9 190 aaKnown RBP8.26□□□□□ -1.09
SNHG1-223ENST00000545440 YIPF1Q9Y548 306 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 COL4A3Q01955 1670 aa8.26□□□□□ -1.09
SNHG1-223ENST00000545440 FAM237AA0A1B0GTK4 181 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 TMEM238LA0A1B0GVL6 79 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 MTMR11A4FU01 709 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 GOLGA8IPA6NC78 632 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 ZNF233A6NK53 670 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 GOLGA8JA6NMD2 632 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 KPNA7A9QM74 516 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 CYB561D2O14569 222 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 ZNF197O14709 1029 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 TGFB1I1O43294 461 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 NARSO43776 548 aaKnown RBP8.25□□□□□ -1.09
SNHG1-223ENST00000545440 ITGB3P05106 788 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 OR4Q2P0C623 313 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 TMEM191BP0C7N4 346 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 AVPR2P30518 371 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 POLR2BP30876 1174 aaKnown RBP8.25□□□□□ -1.09
SNHG1-223ENST00000545440 CLCN5P51795 746 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 SMARCB1Q12824 385 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 CUL4BQ13620 913 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 BECN1Q14457 450 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 SNRNP35Q16560 246 aaKnown RBP8.25□□□□□ -1.09
SNHG1-223ENST00000545440 IQCEQ6IPM2 695 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 CENPPQ6IPU0 288 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 PDZD4Q76G19 769 aaPredicted RBP8.25□□□□□ -1.09
SNHG1-223ENST00000545440 METTL23Q86XA0 190 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 WDR49Q8IV35 697 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 C12orf56Q8IXR9 622 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 CXorf38Q8TB03 319 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 ING5Q8WYH8 240 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 FGF14Q92915 247 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 BORCS6Q96GS4 357 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 PGLYRP2Q96PD5 576 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 CORO1BQ9BR76 489 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 CEP44Q9C0F1 390 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 MTMR12Q9C0I1 747 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 ZCWPW1Q9H0M4 648 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 SMG9Q9H0W8 520 aaKnown RBP8.25□□□□□ -1.09
SNHG1-223ENST00000545440 BLZF1Q9H2G9 400 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 MFSD1Q9H3U5 465 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 PCIF1Q9H4Z3 704 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 PDE11AQ9HCR9 933 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 LATS2Q9NRM7 1088 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 INTS13Q9NVM9 706 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 CEP72Q9P209 647 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 PPM1HQ9ULR3 514 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 PTPRJQ12913 1337 aa8.25□□□□□ -1.09
SNHG1-223ENST00000545440 A0A1B0GVL5 298 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 A0A1W2PQ27 194 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 A0A1W2PQ64 194 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 A0A1W2PQD8 194 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 KLRC4O43908 158 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 ECI2O75521 394 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 CEBPBP17676 345 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 AOC1P19801 751 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 CASP1P29466 404 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 SYKP43405 635 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 AFMP43652 599 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 EPHB3P54753 998 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 RBP5P82980 135 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 NHLH1Q02575 133 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 DUSP4Q13115 394 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 KNOP1Q1ED39 458 aaKnown RBP8.24□□□□□ -1.09
SNHG1-223ENST00000545440 CYP4A22Q5TCH4 519 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 WSCD1Q658N2 575 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 PSAPL1Q6NUJ1 521 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 PARM1Q6UWI2 310 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 CBWD2Q8IUF1 395 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 CCNJLQ8IV13 435 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 THEM5Q8N1Q8 247 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 TMEM86AQ8N2M4 240 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 TOP6BLQ8N6T0 577 aa8.24□□□□□ -1.09
SNHG1-223ENST00000545440 TMEM105Q8N8V8 129 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms