RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CCDC105Q8IYK2 499 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 ARL14EPQ8N8R7 260 aaPredicted RBP16.65■□□□□ 0.26
CCDC78-216ENST00000544996 DTWD2Q8NBA8 298 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 TTC16Q8NEE8 873 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 PRSS33Q8NF86 280 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 OVCA2Q8WZ82 227 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 MSANTD3Q96H12 275 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 ZFYVE19Q96K21 471 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 SMOQ99835 787 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 FBXO44Q9H4M3 255 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 LTB4R2Q9NPC1 389 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 GCNT4Q9P109 453 aa16.65■□□□□ 0.26
CCDC78-216ENST00000544996 TNFRSF10BO14763 440 aa16.64■□□□□ 0.25
CCDC78-216ENST00000544996 BEST1O76090 585 aa16.64■□□□□ 0.25
CCDC78-216ENST00000544996 DCNP07585 359 aaKnown RBP16.64■□□□□ 0.25
CCDC78-216ENST00000544996 CD72P21854 359 aa16.64■□□□□ 0.25
CCDC78-216ENST00000544996 RAD23BP54727 409 aa16.64■□□□□ 0.25
CCDC78-216ENST00000544996 SLC8A3P57103 927 aa16.64■□□□□ 0.25
CCDC78-216ENST00000544996 CLEC20AQ6ZU45 233 aa16.64■□□□□ 0.25
CCDC78-216ENST00000544996 SCAMP5Q8TAC9 235 aa16.64■□□□□ 0.25
CCDC78-216ENST00000544996 SLC22A12Q96S37 553 aa16.64■□□□□ 0.25
CCDC78-216ENST00000544996 C8orf33Q9H7E9 229 aaPredicted RBP16.64■□□□□ 0.25
CCDC78-216ENST00000544996 GKN1Q9NS71 199 aa16.64■□□□□ 0.25
CCDC78-216ENST00000544996 IL37Q9NZH6 218 aa16.64■□□□□ 0.25
CCDC78-216ENST00000544996 ARHGAP26Q9UNA1 814 aa16.64■□□□□ 0.25
CCDC78-216ENST00000544996 ZDBF2Q9HCK1 2354 aa16.63■□□□□ 0.25
CCDC78-216ENST00000544996 ERCC5P28715 1186 aaPredicted RBP16.63■□□□□ 0.25
CCDC78-216ENST00000544996 PLA2G5P39877 138 aa16.63■□□□□ 0.25
CCDC78-216ENST00000544996 DPCR1Q3MIW9 517 aa16.63■□□□□ 0.25
CCDC78-216ENST00000544996 PPP1R26Q5T8A7 1209 aaPredicted RBP16.63■□□□□ 0.25
CCDC78-216ENST00000544996 PPM1KQ8N3J5 372 aa16.63■□□□□ 0.25
CCDC78-216ENST00000544996 SLC4A11Q8NBS3 891 aa16.63■□□□□ 0.25
CCDC78-216ENST00000544996 EHBP1Q8NDI1 1231 aa16.63■□□□□ 0.25
CCDC78-216ENST00000544996 ZMIZ2Q8NF64 920 aa16.63■□□□□ 0.25
CCDC78-216ENST00000544996 FAM3CQ92520 227 aa16.63■□□□□ 0.25
CCDC78-216ENST00000544996 JAKMIP2Q96AA8 810 aa16.63■□□□□ 0.25
CCDC78-216ENST00000544996 CNOT6LQ96LI5 555 aaKnown RBP16.63■□□□□ 0.25
CCDC78-216ENST00000544996 DUSP16Q9BY84 665 aa16.63■□□□□ 0.25
CCDC78-216ENST00000544996 PNPLA8Q9NP80 782 aa16.63■□□□□ 0.25
CCDC78-216ENST00000544996 GTSE1Q9NYZ3 720 aa16.63■□□□□ 0.25
CCDC78-216ENST00000544996 CHORDC1Q9UHD1 332 aaPredicted RBP16.63■□□□□ 0.25
CCDC78-216ENST00000544996 FAM92AA1XBS5 289 aa16.62■□□□□ 0.25
CCDC78-216ENST00000544996 MAGEA9P43362 315 aa16.62■□□□□ 0.25
CCDC78-216ENST00000544996 TNK2Q07912 1038 aa16.62■□□□□ 0.25
CCDC78-216ENST00000544996 TCF15Q12870 199 aa16.62■□□□□ 0.25
CCDC78-216ENST00000544996 MTF1Q14872 753 aa16.62■□□□□ 0.25
CCDC78-216ENST00000544996 PDGFRLQ15198 375 aa16.62■□□□□ 0.25
CCDC78-216ENST00000544996 ITPRIPL2Q3MIP1 535 aa16.62■□□□□ 0.25
CCDC78-216ENST00000544996 CT47A1Q5JQC4 288 aaPredicted RBP16.62■□□□□ 0.25
CCDC78-216ENST00000544996 HECTD3Q5T447 861 aa16.62■□□□□ 0.25
CCDC78-216ENST00000544996 ARHGAP17Q68EM7 881 aa16.62■□□□□ 0.25
CCDC78-216ENST00000544996 RALGPS2Q86X27 583 aaPredicted RBP16.62■□□□□ 0.25
CCDC78-216ENST00000544996 FAM114A1Q8IWE2 563 aa16.62■□□□□ 0.25
CCDC78-216ENST00000544996 GPT2Q8TD30 523 aa16.62■□□□□ 0.25
CCDC78-216ENST00000544996 SH3RF2Q8TEC5 729 aa16.62■□□□□ 0.25
CCDC78-216ENST00000544996 FAM83CQ9BQN1 747 aa16.62■□□□□ 0.25
CCDC78-216ENST00000544996 TLR8Q9NR97 1041 aaKnown RBP16.62■□□□□ 0.25
CCDC78-216ENST00000544996 KIAA1257Q9ULG3 409 aa16.62■□□□□ 0.25
CCDC78-216ENST00000544996 NDRG2Q9UN36 371 aaKnown RBP16.62■□□□□ 0.25
CCDC78-216ENST00000544996 MTF2Q9Y483 593 aaPredicted RBP16.62■□□□□ 0.25
CCDC78-216ENST00000544996 SPECC1L-ADORA2AF8WAN1 911 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 H0Y858 1186 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 MBD3O95983 291 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 OAS1P00973 400 aaKnown RBP16.61■□□□□ 0.25
CCDC78-216ENST00000544996 CD19P15391 556 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 ACO1P21399 889 aaKnown RBP16.61■□□□□ 0.25
CCDC78-216ENST00000544996 TARSP26639 723 aaKnown RBP16.61■□□□□ 0.25
CCDC78-216ENST00000544996 MTIF2P46199 727 aaKnown RBP16.61■□□□□ 0.25
CCDC78-216ENST00000544996 TUBP50607 506 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 SLC7A9P82251 487 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 AMPD2Q01433 879 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 GCNT1Q02742 428 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 RUNX3Q13761 415 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 ZNF77Q15935 545 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 SGO2Q562F6 1265 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 SNX30Q5VWJ9 437 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 TTC8Q8TAM2 541 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 LMO3Q8TAP4 145 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 OSCP1Q8WVF1 389 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 ATOH1Q92858 354 aaPredicted RBP16.61■□□□□ 0.25
CCDC78-216ENST00000544996 MED15Q96RN5 788 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 NACA2Q9H009 215 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 RNF38Q9H0F5 515 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 EBF3Q9H4W6 596 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 THAP9Q9H5L6 903 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 DUS2Q9NX74 493 aaKnown RBP16.61■□□□□ 0.25
CCDC78-216ENST00000544996 GMIPQ9P107 970 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 DLGAP2Q9P1A6 1054 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 HESX1Q9UBX0 185 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 PCDHB4Q9Y5E5 795 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 ZNF318Q5VUA4 2279 aa16.61■□□□□ 0.25
CCDC78-216ENST00000544996 OLFM2O95897 454 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 PAEPP09466 180 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 ZDHHC11BP0C7U3 371 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 MBL2P11226 248 aaPredicted RBP16.6■□□□□ 0.25
CCDC78-216ENST00000544996 VDRP11473 427 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 TCF3P15923 654 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 CTHP32929 405 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 IFNAR2P48551 515 aa16.6■□□□□ 0.25
CCDC78-216ENST00000544996 NHLH1Q02575 133 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms