RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 POLMQ9NP87 494 aaPredicted RBP13.73□□□□□ -0.21
USP28-212ENST00000544750 CRTAC1Q9NQ79 661 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 SNX9Q9Y5X1 595 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 CELSR3Q9NYQ7 3312 aa13.73□□□□□ -0.21
USP28-212ENST00000544750 GCN1Q92616 2671 aaKnown RBP13.72□□□□□ -0.21
USP28-212ENST00000544750 APC2O95996 2303 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 MYMKA6NI61 221 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 TBCAO75347 108 aaKnown RBP13.72□□□□□ -0.21
USP28-212ENST00000544750 CD59P13987 128 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 LMO2P25791 158 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 PCSK1P29120 753 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 UBA7P41226 1012 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 GRIN1Q05586 938 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 DUOXA1Q1HG43 343 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 EOGTQ5NDL2 527 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 VSTM1Q6UX27 236 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 DENND5BQ6ZUT9 1274 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 TTC30AQ86WT1 665 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 ADGRF2Q8IZF7 708 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 CHCHD4Q8N4Q1 142 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 KBTBD7Q8WVZ9 684 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 LARP4BQ92615 738 aaKnown RBP13.72□□□□□ -0.21
USP28-212ENST00000544750 ZHX3Q9H4I2 956 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 ZDHHC4Q9NPG8 344 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 FSCN3Q9NQT6 498 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 ITGA11Q9UKX5 1188 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 SLC6A14Q9UN76 642 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 GPSM3Q9Y4H4 160 aa13.72□□□□□ -0.21
USP28-212ENST00000544750 ZNF840PA6NDX5 716 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 MAP3K13O43283 966 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 GJB3O75712 270 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 OAS1P00973 400 aaKnown RBP13.71□□□□□ -0.21
USP28-212ENST00000544750 APODP05090 189 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 KRT18P05783 430 aaKnown RBP13.71□□□□□ -0.21
USP28-212ENST00000544750 SERPINF2P08697 491 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 BDNFP23560 247 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 GRIA2P42262 883 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 TNFRSF4P43489 277 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 BYSLQ13895 437 aaKnown RBP13.71□□□□□ -0.21
USP28-212ENST00000544750 LMBRD2Q68DH5 695 aaPredicted RBP13.71□□□□□ -0.21
USP28-212ENST00000544750 MCTP1Q6DN14 999 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 C4orf50Q6ZRC1 276 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 DPH6Q7L8W6 267 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 SFR1Q86XK3 245 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 CSGALNACT2Q8N6G5 542 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 CEP76Q8TAP6 659 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 CACTINQ8WUQ7 758 aaKnown RBP13.71□□□□□ -0.21
USP28-212ENST00000544750 HMGB4Q8WW32 186 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 MYLPFQ96A32 169 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 SAAL1Q96ER3 474 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 SYT15Q9BQS2 421 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 FAM213AQ9BRX8 229 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 TRPM5Q9NZQ8 1165 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 MAGEC2Q9UBF1 373 aaPredicted RBP13.71□□□□□ -0.21
USP28-212ENST00000544750 HCN2Q9UL51 889 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 CPQQ9Y646 472 aa13.71□□□□□ -0.21
USP28-212ENST00000544750 SLC9A3R1O14745 358 aaPredicted RBP13.7□□□□□ -0.22
USP28-212ENST00000544750 DDIT3P35638 169 aa13.7□□□□□ -0.22
USP28-212ENST00000544750 PPP3CCP48454 512 aa13.7□□□□□ -0.22
USP28-212ENST00000544750 PSMC1P62191 440 aaKnown RBP13.7□□□□□ -0.22
USP28-212ENST00000544750 NOP14P78316 857 aaKnown RBP13.7□□□□□ -0.22
USP28-212ENST00000544750 RESTQ13127 1097 aa13.7□□□□□ -0.22
USP28-212ENST00000544750 ZNF423Q2M1K9 1284 aa13.7□□□□□ -0.22
USP28-212ENST00000544750 SOWAHCQ53LP3 525 aaPredicted RBP13.7□□□□□ -0.22
USP28-212ENST00000544750 ETFBKMTQ8IXQ9 262 aa13.7□□□□□ -0.22
USP28-212ENST00000544750 MINDY1Q8N5J2 469 aa13.7□□□□□ -0.22
USP28-212ENST00000544750 CD248Q9HCU0 757 aa13.7□□□□□ -0.22
USP28-212ENST00000544750 ARHGEF4Q9NR80 690 aa13.7□□□□□ -0.22
USP28-212ENST00000544750 DNAAF2Q9NVR5 837 aaKnown RBP13.7□□□□□ -0.22
USP28-212ENST00000544750 BCCIPQ9P287 314 aaKnown RBP eCLIP13.7□□□□□ -0.22
USP28-212ENST00000544750 CDH9Q9ULB4 789 aa13.7□□□□□ -0.22
USP28-212ENST00000544750 NME7Q9Y5B8 376 aa13.7□□□□□ -0.22
USP28-212ENST00000544750 TCRBV21S2A2A0A5A6 115 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 ARHGAP33O14559 1287 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 SCAMP3O14828 347 aaKnown RBP13.69□□□□□ -0.22
USP28-212ENST00000544750 AP5Z1O43299 807 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 OPHN1O60890 802 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 LDHAP00338 332 aaKnown RBP13.69□□□□□ -0.22
USP28-212ENST00000544750 CFIP05156 583 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 GABRG2P18507 467 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 GARTP22102 1010 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 LONP1P36776 959 aaKnown RBP13.69□□□□□ -0.22
USP28-212ENST00000544750 GRIK1P39086 918 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 RBP5P82980 135 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 KDSRQ06136 332 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 GFPT1Q06210 699 aaPredicted RBP13.69□□□□□ -0.22
USP28-212ENST00000544750 ZNF33AQ06730 810 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 HNRNPDQ14103 355 aaKnown RBP13.69□□□□□ -0.22
USP28-212ENST00000544750 L1TD1Q5T7N2 865 aaKnown RBP13.69□□□□□ -0.22
USP28-212ENST00000544750 SLC41A1Q8IVJ1 513 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 HDDC3Q8N4P3 179 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 OR2I1PQ8NGU4 316 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 KCNV2Q8TDN2 545 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 DNAJC19Q96DA6 116 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 PCED1BQ96HM7 432 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 ZFRQ96KR1 1074 aaKnown RBP13.69□□□□□ -0.22
USP28-212ENST00000544750 MTMR12Q9C0I1 747 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 PDE11AQ9HCR9 933 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 TMEM30AQ9NV96 361 aa13.69□□□□□ -0.22
USP28-212ENST00000544750 SMPD4Q9NXE4 827 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms