RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 CCDC127Q96BQ5 260 aa17.31■□□□□ 0.36
DDX55-212ENST00000544738 TRMT2BQ96GJ1 504 aaKnown RBP17.31■□□□□ 0.36
DDX55-212ENST00000544738 PAGE5Q96GU1 130 aa17.31■□□□□ 0.36
DDX55-212ENST00000544738 MYRFLQ96LU7 910 aa17.31■□□□□ 0.36
DDX55-212ENST00000544738 CEP295NLQ96MC4 621 aa17.31■□□□□ 0.36
DDX55-212ENST00000544738 SYT15Q9BQS2 421 aa17.31■□□□□ 0.36
DDX55-212ENST00000544738 EBF3Q9H4W6 596 aa17.31■□□□□ 0.36
DDX55-212ENST00000544738 SLC32A1Q9H598 525 aa17.31■□□□□ 0.36
DDX55-212ENST00000544738 FBRSL1Q9HCM7 1045 aaKnown RBP17.31■□□□□ 0.36
DDX55-212ENST00000544738 EXOC1Q9NV70 894 aa17.31■□□□□ 0.36
DDX55-212ENST00000544738 MAGEC2Q9UBF1 373 aaPredicted RBP17.31■□□□□ 0.36
DDX55-212ENST00000544738 ATP6V1DQ9Y5K8 247 aa17.31■□□□□ 0.36
DDX55-212ENST00000544738 GTF3C3Q9Y5Q9 886 aa17.31■□□□□ 0.36
DDX55-212ENST00000544738 NUP210Q8TEM1 1887 aaPredicted RBP17.31■□□□□ 0.36
DDX55-212ENST00000544738 APBB3O95704 486 aa17.3■□□□□ 0.36
DDX55-212ENST00000544738 CST3P01034 146 aaPredicted RBP17.3■□□□□ 0.36
DDX55-212ENST00000544738 PFKFB1P16118 471 aa17.3■□□□□ 0.36
DDX55-212ENST00000544738 WARSP23381 471 aaKnown RBP17.3■□□□□ 0.36
DDX55-212ENST00000544738 GPR15P49685 360 aa17.3■□□□□ 0.36
DDX55-212ENST00000544738 GALK1P51570 392 aa17.3■□□□□ 0.36
DDX55-212ENST00000544738 TRPC3Q13507 836 aa17.3■□□□□ 0.36
DDX55-212ENST00000544738 RUNX3Q13761 415 aa17.3■□□□□ 0.36
DDX55-212ENST00000544738 TRIM68Q6AZZ1 485 aa17.3■□□□□ 0.36
DDX55-212ENST00000544738 VSTM1Q6UX27 236 aa17.3■□□□□ 0.36
DDX55-212ENST00000544738 CYP2U1Q7Z449 544 aa17.3■□□□□ 0.36
DDX55-212ENST00000544738 MON1AQ86VX9 555 aa17.3■□□□□ 0.36
DDX55-212ENST00000544738 GRAMD1CQ8IYS0 662 aa17.3■□□□□ 0.36
DDX55-212ENST00000544738 MAB21L3Q8N8X9 362 aa17.3■□□□□ 0.36
DDX55-212ENST00000544738 RPLP0P6Q8NHW5 317 aa17.3■□□□□ 0.36
DDX55-212ENST00000544738 SNX25Q9H3E2 840 aa17.3■□□□□ 0.36
DDX55-212ENST00000544738 KIF9Q9HAQ2 790 aa17.3■□□□□ 0.36
DDX55-212ENST00000544738 TDP1Q9NUW8 608 aa17.3■□□□□ 0.36
DDX55-212ENST00000544738 ASCC3Q8N3C0 2202 aaKnown RBP17.29■□□□□ 0.36
DDX55-212ENST00000544738 PCNX2A6NKB5 2137 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 IGSF10Q6WRI0 2623 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 A0A1B0GVL5 298 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 SPAARA0A1B0GVQ0 90 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 OTOL1A6NHN0 477 aaPredicted RBP17.29■□□□□ 0.36
DDX55-212ENST00000544738 KLRC4O43908 158 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 TACC1O75410 805 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 NOL4O94818 638 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 STAU1O95793 577 aaKnown RBP17.29■□□□□ 0.36
DDX55-212ENST00000544738 LMO2P25791 158 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 ATICP31939 592 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 AP3M2P53677 418 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 WDR72Q3MJ13 1102 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 USP39Q53GS9 565 aaKnown RBP17.29■□□□□ 0.36
DDX55-212ENST00000544738 SDHAF4Q5VUM1 108 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 SCN4BQ8IWT1 228 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 FSIP1Q8NA03 581 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 TMEM174Q8WUU8 243 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 PIGKQ92643 395 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 SCAND2PQ9GZW5 306 aaPredicted RBP17.29■□□□□ 0.36
DDX55-212ENST00000544738 HPS4Q9NQG7 708 aa17.29■□□□□ 0.36
DDX55-212ENST00000544738 PHACTR2O75167 634 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 ATP2C2O75185 946 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 KIF20AO95235 890 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 PDGFRBP09619 1106 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 DRD1P21728 446 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 GNL1P36915 607 aaPredicted RBP17.28■□□□□ 0.36
DDX55-212ENST00000544738 MAPK8P45983 427 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 DHPSP49366 369 aaPredicted RBP17.28■□□□□ 0.36
DDX55-212ENST00000544738 TNNC1P63316 161 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 SIM1P81133 766 aaPredicted RBP17.28■□□□□ 0.36
DDX55-212ENST00000544738 AMPD2Q01433 879 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 STK4Q13043 487 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 DMC1Q14565 340 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 ZNF268Q14587 947 aaPredicted RBP17.28■□□□□ 0.36
DDX55-212ENST00000544738 KMT5BQ4FZB7 885 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 PMS2CLQ68D20 193 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 TXNDC8Q6A555 127 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 SYT13Q7L8C5 426 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 PDZD3Q86UT5 571 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 SLC9A9Q8IVB4 645 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 CCDC47Q96A33 483 aaKnown RBP17.28■□□□□ 0.36
DDX55-212ENST00000544738 SYAP1Q96A49 352 aaPredicted RBP17.28■□□□□ 0.36
DDX55-212ENST00000544738 CHFRQ96EP1 664 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 SPATA17Q96L03 361 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 FAM83CQ9BQN1 747 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 EHD2Q9NZN4 543 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 EBF1Q9UH73 591 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 HPSEQ9Y251 543 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 GON4LQ3T8J9 2241 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 EML5Q05BV3 1969 aa17.28■□□□□ 0.36
DDX55-212ENST00000544738 PDXKO00764 312 aa17.27■□□□□ 0.36
DDX55-212ENST00000544738 HCRTO43612 131 aa17.27■□□□□ 0.36
DDX55-212ENST00000544738 SYKP43405 635 aa17.27■□□□□ 0.36
DDX55-212ENST00000544738 PSMC1P62191 440 aaKnown RBP17.27■□□□□ 0.36
DDX55-212ENST00000544738 NAIF1Q69YI7 327 aaPredicted RBP17.27■□□□□ 0.36
DDX55-212ENST00000544738 CC2D1AQ6P1N0 951 aaPredicted RBP17.27■□□□□ 0.36
DDX55-212ENST00000544738 KIAA0895Q8NCT3 520 aa17.27■□□□□ 0.36
DDX55-212ENST00000544738 OR6B3Q8NGW1 331 aa17.27■□□□□ 0.36
DDX55-212ENST00000544738 MYCBPAPQ8TBZ2 947 aa17.27■□□□□ 0.36
DDX55-212ENST00000544738 PARD3BQ8TEW8 1205 aa17.27■□□□□ 0.36
DDX55-212ENST00000544738 ZNF516Q92618 1163 aa17.27■□□□□ 0.36
DDX55-212ENST00000544738 USP13Q92995 863 aaPredicted RBP17.27■□□□□ 0.36
DDX55-212ENST00000544738 P2RY13Q9BPV8 354 aa17.27■□□□□ 0.36
DDX55-212ENST00000544738 TPSD1Q9BZJ3 242 aa17.27■□□□□ 0.36
DDX55-212ENST00000544738 CRTAC1Q9NQ79 661 aa17.27■□□□□ 0.36
DDX55-212ENST00000544738 DMAC2Q9NW81 257 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms