RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 OSCP1Q8WVF1 389 aa13.96□□□□□ -0.17
CIT-214ENST00000544588 TTLL2Q9BWV7 592 aa13.96□□□□□ -0.17
CIT-214ENST00000544588 NIF3L1Q9GZT8 377 aa13.96□□□□□ -0.17
CIT-214ENST00000544588 NACA2Q9H009 215 aa13.96□□□□□ -0.17
CIT-214ENST00000544588 HPS4Q9NQG7 708 aa13.96□□□□□ -0.17
CIT-214ENST00000544588 TMEM30AQ9NV96 361 aa13.96□□□□□ -0.17
CIT-214ENST00000544588 RAB20Q9NX57 234 aa13.96□□□□□ -0.17
CIT-214ENST00000544588 OTOL1A6NHN0 477 aaPredicted RBP13.95□□□□□ -0.18
CIT-214ENST00000544588 LEFTY2O00292 366 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 FAM200BP0CF97 657 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 MBL2P11226 248 aaPredicted RBP13.95□□□□□ -0.18
CIT-214ENST00000544588 CXCL12P48061 93 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 CCR3P51677 355 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 LRRC63Q05C16 580 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 ENPEPQ07075 957 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 NR1H3Q13133 447 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 ZNF77Q15935 545 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 DGKKQ5KSL6 1271 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 ZNF687Q8N1G0 1237 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 FBXL13Q8NEE6 735 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 PDZD8Q8NEN9 1154 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 SEMA4DQ92854 862 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 EXOC4Q96A65 974 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 CYFIP2Q96F07 1278 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 HEXIM2Q96MH2 286 aaKnown RBP13.95□□□□□ -0.18
CIT-214ENST00000544588 TWNKQ96RR1 684 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 RNF38Q9H0F5 515 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 LINC00597Q9H2U6 94 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 SEMA4AQ9H3S1 761 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 ECT2Q9H8V3 914 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 ARMCX3Q9UH62 379 aaPredicted RBP13.95□□□□□ -0.18
CIT-214ENST00000544588 ARHGAP26Q9UNA1 814 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 CPQQ9Y646 472 aa13.95□□□□□ -0.18
CIT-214ENST00000544588 SCAMP3O14828 347 aaKnown RBP13.94□□□□□ -0.18
CIT-214ENST00000544588 SLC16A3O15427 465 aaKnown RBP13.94□□□□□ -0.18
CIT-214ENST00000544588 BEST1O76090 585 aa13.94□□□□□ -0.18
CIT-214ENST00000544588 PFKLP17858 780 aa13.94□□□□□ -0.18
CIT-214ENST00000544588 SATB1Q01826 763 aa13.94□□□□□ -0.18
CIT-214ENST00000544588 ZNF528Q3MIS6 628 aa13.94□□□□□ -0.18
CIT-214ENST00000544588 CCDC40Q4G0X9 1142 aa13.94□□□□□ -0.18
CIT-214ENST00000544588 COBLL1Q53SF7 1204 aa13.94□□□□□ -0.18
CIT-214ENST00000544588 Q6ZS52 159 aa13.94□□□□□ -0.18
CIT-214ENST00000544588 SPATA20Q8TB22 786 aa13.94□□□□□ -0.18
CIT-214ENST00000544588 ATP2A3Q93084 1043 aa13.94□□□□□ -0.18
CIT-214ENST00000544588 DHTKD1Q96HY7 919 aaPredicted RBP13.94□□□□□ -0.18
CIT-214ENST00000544588 SMOQ99835 787 aa13.94□□□□□ -0.18
CIT-214ENST00000544588 ZSCAN32Q9NX65 697 aa13.94□□□□□ -0.18
CIT-214ENST00000544588 CHMP5Q9NZZ3 219 aa13.94□□□□□ -0.18
CIT-214ENST00000544588 GMIPQ9P107 970 aa13.94□□□□□ -0.18
CIT-214ENST00000544588 COL4A3Q01955 1670 aa13.94□□□□□ -0.18
CIT-214ENST00000544588 CILPO75339 1184 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 CD44P16070 742 aaKnown RBP13.93□□□□□ -0.18
CIT-214ENST00000544588 PPP1R2P41236 205 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 GALK1P51570 392 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 STX17P56962 302 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 LRMPQ12912 555 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 USP4Q13107 963 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 CBWD6Q4V339 395 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 CBWD3Q5JTY5 395 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 CBWD5Q5RIA9 395 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 HECTD3Q5T447 861 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 ELOA2Q8IYF1 753 aaPredicted RBP13.93□□□□□ -0.18
CIT-214ENST00000544588 SPEM1Q8N4L4 309 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 ZMIZ2Q8NF64 920 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 NELFBQ8WX92 580 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 TATDN2Q93075 761 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 P2RY13Q9BPV8 354 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 IER2Q9BTL4 223 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 FBXO44Q9H4M3 255 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 METTL14Q9HCE5 456 aaKnown RBP13.93□□□□□ -0.18
CIT-214ENST00000544588 CFAP97Q9P2B7 532 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 CTNND2Q9UQB3 1225 aa13.93□□□□□ -0.18
CIT-214ENST00000544588 MYH15Q9Y2K3 1946 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 COCHO43405 550 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 NFATC1O95644 943 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 ACO1P21399 889 aaKnown RBP13.92□□□□□ -0.18
CIT-214ENST00000544588 GJA4P35212 333 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 ANP32AP39687 249 aaKnown RBP13.92□□□□□ -0.18
CIT-214ENST00000544588 NRLP54845 237 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 SLC7A9P82251 487 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 ZXDBP98169 803 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 INCA1Q0VD86 236 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 GAS6Q14393 721 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 CAMK4Q16566 473 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 EML3Q32P44 896 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 NAIF1Q69YI7 327 aaPredicted RBP13.92□□□□□ -0.18
CIT-214ENST00000544588 HEATR6Q6AI08 1181 aaKnown RBP13.92□□□□□ -0.18
CIT-214ENST00000544588 FILIP1Q7Z7B0 1213 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 CREBRFQ8IUR6 639 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 WHAMMQ8TF30 809 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 OVCA2Q8WZ82 227 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 CHFRQ96EP1 664 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 HNRNPABQ99729 332 aaKnown RBP13.92□□□□□ -0.18
CIT-214ENST00000544588 PRMT8Q9NR22 394 aaPredicted RBP13.92□□□□□ -0.18
CIT-214ENST00000544588 CISHQ9NSE2 258 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 COMMD8Q9NX08 183 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 SH3BP1Q9Y3L3 701 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 PCDHGA2Q9Y5H1 932 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 ANK1P16157 1881 aa13.92□□□□□ -0.18
CIT-214ENST00000544588 ZFHX2Q9C0A1 2572 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms