RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 TUBGCP5Q96RT8 1024 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 PDCD2LQ9BRP1 358 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 RNF41Q9H4P4 317 aaPredicted RBP6.89□□□□□ -1.31
CPSF7-222ENST00000544585 RC3H2Q9HBD1 1191 aaKnown RBP6.89□□□□□ -1.31
CPSF7-222ENST00000544585 COL20A1Q9P218 1284 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 ASH2LQ9UBL3 628 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 FBLN5Q9UBX5 448 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 ZC3H7BQ9UGR2 993 aaKnown RBP6.89□□□□□ -1.31
CPSF7-222ENST00000544585 TUBD1Q9UJT1 453 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 PCDHB4Q9Y5E5 795 aa6.89□□□□□ -1.31
CPSF7-222ENST00000544585 SIP14410 1827 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 ADGRA3Q8IWK6 1321 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 NRCAMQ92823 1304 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 PRSS38A1L453 326 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 A6NNZ2 444 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 C1QTNF9BB2RNN3 333 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 FAM227AF5H4B4 570 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 H0Y858 1186 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 LINC01565O15544 149 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 NRDCO43847 1150 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 TBX10O75333 385 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 TADA3O75528 432 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 TCEA3O75764 348 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 STAM2O75886 525 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 HRGP04196 525 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 RPLP2P05387 115 aaKnown RBP6.88□□□□□ -1.31
CPSF7-222ENST00000544585 LINC00271P0C7V0 271 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 GOLGA8HP0CJ92 632 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 STAG3L1P0CL83 205 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 HSD17B4P51659 736 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 FAM193AP78312 1265 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 SP2Q02086 613 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 GHRHRQ02643 423 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 IKZF1Q13422 519 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 RAPGEF1Q13905 1077 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 CAMK1Q14012 370 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 MCMDC2Q4G0Z9 681 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 INO80DQ53TQ3 878 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-222ENST00000544585 PITRM1Q5JRX3 1037 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 TTC38Q5R3I4 469 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 MBNL2Q5VZF2 373 aaKnown RBP6.88□□□□□ -1.31
CPSF7-222ENST00000544585 TAF2Q6P1X5 1199 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 C1orf228Q6PIY5 440 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 IQCA1Q86XH1 822 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 DCP2Q8IU60 420 aaKnown RBP6.88□□□□□ -1.31
CPSF7-222ENST00000544585 DENND1CQ8IV53 801 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 ANKS4BQ8N8V4 417 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 FAM156AQ8NDB6 213 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 NUP43Q8NFH3 380 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 ASB15Q8WXK1 588 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 ESR2Q92731 530 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 RPGRIP1Q96KN7 1286 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 CDCA3Q99618 268 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-222ENST00000544585 AMNQ9BXJ7 453 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 FTHL17Q9BXU8 183 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 VAT1LQ9HCJ6 419 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 ALG13Q9NP73 1137 aaKnown RBP6.88□□□□□ -1.31
CPSF7-222ENST00000544585 TLR9Q9NR96 1032 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 SETD4Q9NVD3 440 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 ZNF215Q9UL58 517 aaPredicted RBP6.88□□□□□ -1.31
CPSF7-222ENST00000544585 TELO2Q9Y4R8 837 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 SQORQ9Y6N5 450 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 CACNA1BQ00975 2339 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 MICAL3Q7RTP6 2002 aa6.88□□□□□ -1.31
CPSF7-222ENST00000544585 H3BML4 177 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 RNF225M0QZC1 329 aaPredicted RBP6.87□□□□□ -1.31
CPSF7-222ENST00000544585 WIPF1O43516 503 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 DHX16O60231 1041 aaKnown RBP6.87□□□□□ -1.31
CPSF7-222ENST00000544585 PRPF6O94906 941 aaKnown RBP6.87□□□□□ -1.31
CPSF7-222ENST00000544585 CHRNA1P02708 482 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 LGALS2P05162 132 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 ITGB1P05556 798 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 MMEP08473 750 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 PARP1P09874 1014 aaKnown RBP6.87□□□□□ -1.31
CPSF7-222ENST00000544585 SRGAP2BP0DMP2 458 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 CCND2P30279 289 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 NBL1P41271 181 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 NRIP1P48552 1158 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 ADAM17P78536 824 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 MVKQ03426 396 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 PRKCQQ04759 706 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 UBE3AQ05086 875 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 PGM5Q15124 567 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 LONRF1Q17RB8 773 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 MUM1Q2TAK8 710 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 QRICH1Q2TAL8 776 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 PGS1Q32NB8 556 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 ASPRV1Q53RT3 343 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 VPS53Q5VIR6 699 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 TSHZ3Q63HK5 1081 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 BICRALQ6AI39 1079 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 METTL7BQ6UX53 244 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 TMEM184AQ6ZMB5 413 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 OVCH2Q7RTZ1 564 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 PPP1R35Q8TAP8 253 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 POF1BQ8WVV4 589 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 TNPO1Q92973 898 aaKnown RBP6.87□□□□□ -1.31
CPSF7-222ENST00000544585 MYL10Q9BUA6 226 aa6.87□□□□□ -1.31
CPSF7-222ENST00000544585 NAA15Q9BXJ9 866 aaKnown RBP6.87□□□□□ -1.31
CPSF7-222ENST00000544585 KCTD10Q9H3F6 313 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms