RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 MRPL4Q9BYD3 311 aaKnown RBP14.33□□□□□ -0.12
VPS33A-208ENST00000543633 ADAMTS5Q9UNA0 930 aa14.33□□□□□ -0.12
VPS33A-208ENST00000543633 DICER1Q9UPY3 1922 aaKnown RBP14.32□□□□□ -0.12
VPS33A-208ENST00000543633 TCRBV9S1A1TA0A576 114 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 WDR91A4D1P6 747 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 CFAP69A5D8W1 941 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 H0Y3Z8 333 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 WNT10BO00744 389 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 OGTO15294 1046 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 IL1R2P27930 398 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 RFC1P35251 1148 aaPredicted RBP14.32□□□□□ -0.12
VPS33A-208ENST00000543633 SERPINB4P48594 390 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 MYL6P60660 151 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 ROR1Q01973 937 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 OVGP1Q12889 678 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 MTMR2Q13614 643 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 TFDP2Q14188 446 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 GSTA3Q16772 222 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 C11orf91Q3C1V1 193 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 FAM47CQ5HY64 1035 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 CYP4A22Q5TCH4 519 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 SNX30Q5VWJ9 437 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 DSTYKQ6XUX3 929 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 LRRC74BQ6ZQY2 392 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 SLC26A11Q86WA9 606 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 LRRC6Q86X45 466 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 UNC45BQ8IWX7 931 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 ARFGAP1Q8N6T3 406 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 STMN2Q93045 179 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 DNAJB4Q9UDY4 337 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 CHMP2BQ9UQN3 213 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 RIPK3Q9Y572 518 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 SBF1O95248 1867 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 ANK1P16157 1881 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 DPPA5A6NC42 116 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 I3L4J1 428 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 FCHO1O14526 889 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 TRDMT1O14717 391 aaKnown RBP14.32□□□□□ -0.12
VPS33A-208ENST00000543633 GAS2O43903 313 aaKnown RBP14.32□□□□□ -0.12
VPS33A-208ENST00000543633 ENDOD1O94919 500 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 CST3P01034 146 aaPredicted RBP14.32□□□□□ -0.12
VPS33A-208ENST00000543633 EDN1P05305 212 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 NEFHP12036 1026 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 CDC25CP30307 473 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 ELK3P41970 407 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 DYNLT1P63172 113 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 BASP1P80723 227 aaKnown RBP14.32□□□□□ -0.12
VPS33A-208ENST00000543633 AP1B1Q10567 949 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 TRPC3Q13507 836 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 CAPSQ13938 189 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 TARBP2Q15633 366 aaKnown RBP14.32□□□□□ -0.12
VPS33A-208ENST00000543633 ZNF699Q32M78 642 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 ACSBG2Q5FVE4 666 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 LGSNQ5TDP6 509 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 ANGEL2Q5VTE6 544 aaKnown RBP14.32□□□□□ -0.12
VPS33A-208ENST00000543633 ATG16L1Q676U5 607 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 SNRNP48Q6IEG0 339 aaKnown RBP14.32□□□□□ -0.12
VPS33A-208ENST00000543633 C4orf22Q6V702 233 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 RFX6Q8HWS3 928 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 SLC4A11Q8NBS3 891 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 TFAP2BQ92481 460 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 LRRC39Q96DD0 335 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 RTP4Q96DX8 246 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 SERAC1Q96JX3 654 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 C12orf42Q96LP6 360 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 TEPSINQ96N21 525 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 FAM111AQ96PZ2 611 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 MTMR12Q9C0I1 747 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 ZWILCHQ9H900 591 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 MYOZ2Q9NPC6 264 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 TAS2R1Q9NYW7 299 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 PAK5Q9P286 719 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 ANGPTL2Q9UKU9 493 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 ASB3Q9Y575 518 aa14.32□□□□□ -0.12
VPS33A-208ENST00000543633 TCRBV7S3A2A0A539 114 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 KBTBD13C9JR72 458 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 KRT37O76014 449 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 RNF8O76064 485 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 EGFRP00533 1210 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 SNRPAP09012 282 aaKnown RBP14.31□□□□□ -0.12
VPS33A-208ENST00000543633 RBP3P10745 1247 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 MAGEA6P43360 314 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 ASPAP45381 313 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 GABRB2P47870 512 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 KPNB1Q14974 876 aaKnown RBP14.31□□□□□ -0.12
VPS33A-208ENST00000543633 NAIF1Q69YI7 327 aaPredicted RBP14.31□□□□□ -0.12
VPS33A-208ENST00000543633 DENND1BQ6P3S1 775 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 TMPRSS6Q8IU80 811 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 JOSD2Q8TAC2 188 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 CCDC110Q8TBZ0 833 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 MTBPQ96DY7 904 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 CCDC28BQ9BUN5 200 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 IQCGQ9H095 443 aaKnown RBP14.31□□□□□ -0.12
VPS33A-208ENST00000543633 WWP1Q9H0M0 922 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 ACAD9Q9H845 621 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 GOLGA8RI6L899 631 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 COPEO14579 308 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 BGNP21810 368 aa14.31□□□□□ -0.12
VPS33A-208ENST00000543633 GMPSP49915 693 aaPredicted RBP14.31□□□□□ -0.12
VPS33A-208ENST00000543633 PSMC1P62191 440 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms