RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 ZDHHC14Q8IZN3 488 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 CRIPAKQ8N1N5 446 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 ARFGAP1Q8N6T3 406 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 EIF1ADQ8N9N8 165 aaKnown RBP9.79□□□□□ -0.84
GNE-206ENST00000543356 RXFP2Q8WXD0 754 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 KHSRPQ92945 711 aaKnown RBP eCLIP9.79□□□□□ -0.84
GNE-206ENST00000543356 SLITRK1Q96PX8 696 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 PKMYT1Q99640 499 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 MED10Q9BTT4 135 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 UBXN6Q9BZV1 441 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 KRT82Q9NSB4 513 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 TBX21Q9UL17 535 aa9.79□□□□□ -0.84
GNE-206ENST00000543356 NLRC5Q86WI3 1866 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 TCRBV7S2A1N4TA0A589 114 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 MYBPHLA2RUH7 354 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 CLDN5O00501 218 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 RNF8O76064 485 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 ITGB1P05556 798 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 RARAP10276 462 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 GJA8P48165 433 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 FNTAP49354 379 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 RNASELQ05823 741 aaKnown RBP9.78□□□□□ -0.84
GNE-206ENST00000543356 CCDC142Q17RM4 750 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 FAM171BQ6P995 826 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 ADAT2Q7Z6V5 191 aaKnown RBP9.78□□□□□ -0.84
GNE-206ENST00000543356 PIGZQ86VD9 579 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 CCDC50Q8IVM0 306 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 SCUBE3Q8IX30 993 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 ABI1Q8IZP0 508 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 THEM5Q8N1Q8 247 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 DNAJC5GQ8N7S2 189 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 PCED1BQ96HM7 432 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 CASD1Q96PB1 797 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 FAM193BQ96PV7 902 aaPredicted RBP9.78□□□□□ -0.84
GNE-206ENST00000543356 LRRC19Q9H756 370 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 PCYOX1Q9UHG3 505 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 LRFN2Q9ULH4 789 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 LTBP2Q14767 1821 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 COL4A4P53420 1690 aaPredicted RBP9.78□□□□□ -0.84
GNE-206ENST00000543356 MICAL3Q7RTP6 2002 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 FAM187AA6NFU0 413 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 ZMYND10O75800 440 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 SEC31AO94979 1220 aaKnown RBP9.78□□□□□ -0.84
GNE-206ENST00000543356 RALAP11233 206 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 PDGFRAP16234 1089 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 DESP17661 470 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 RFC2P35250 354 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 GJC1P36383 396 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 FLT3P36888 993 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 PTPN9P43378 593 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 C1QTNF8P60827 252 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 MRPS25P82663 173 aaKnown RBP9.78□□□□□ -0.84
GNE-206ENST00000543356 GUCY2DQ02846 1103 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 MAPRE1Q15691 268 aaKnown RBP9.78□□□□□ -0.84
GNE-206ENST00000543356 OVOS1Q6IE37 1185 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 NPAS4Q8IUM7 802 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 HASPINQ8TF76 798 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 SEC14L1Q92503 715 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 MYLPFQ96A32 169 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 SMARCD1Q96GM5 515 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 SCLYQ96I15 445 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 MRPL9Q9BYD2 267 aaKnown RBP9.78□□□□□ -0.84
GNE-206ENST00000543356 OSBPL8Q9BZF1 889 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 AMACRQ9UHK6 382 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 PTPRDP23468 1912 aa9.78□□□□□ -0.84
GNE-206ENST00000543356 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.77□□□□□ -0.84
GNE-206ENST00000543356 TRUB2O95900 331 aaKnown RBP9.77□□□□□ -0.84
GNE-206ENST00000543356 LCP1P13796 627 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 MIPP30301 263 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 SDC4P31431 198 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 DR1Q01658 176 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 ADIGQ0VDE8 80 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 CUL1Q13616 776 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 SMC1AQ14683 1233 aaKnown RBP9.77□□□□□ -0.84
GNE-206ENST00000543356 CCDC14Q49A88 953 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 EFHC1Q5JVL4 640 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 TXNRD3NBQ6F5E7 133 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 SPOCD1Q6ZMY3 1216 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 DIS3LQ8TF46 1054 aaKnown RBP9.77□□□□□ -0.84
GNE-206ENST00000543356 AENQ8WTP8 325 aaKnown RBP9.77□□□□□ -0.84
GNE-206ENST00000543356 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.77□□□□□ -0.843e-10■■■■■ 88.3
GNE-206ENST00000543356 SLCO2A1Q92959 643 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 MAGOHBQ96A72 148 aaKnown RBP9.77□□□□□ -0.84
GNE-206ENST00000543356 TMEM175Q9BSA9 504 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 HERPUD2Q9BSE4 406 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 C11orf84Q9BUA3 381 aaPredicted RBP9.77□□□□□ -0.84
GNE-206ENST00000543356 PPP1R12CQ9BZL4 782 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 CXorf56Q9H5V9 222 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 EPB41L5Q9HCM4 733 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 CSNK1G1Q9HCP0 422 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 HOMER3Q9NSC5 361 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 SUFUQ9UMX1 484 aa9.77□□□□□ -0.84
GNE-206ENST00000543356 FNDC1Q4ZHG4 1894 aaPredicted RBP9.77□□□□□ -0.85
GNE-206ENST00000543356 F8W810 466 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 TTI1O43156 1089 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 TRAPPC3O43617 180 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 DAB1O75553 588 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 AP1G2O75843 785 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 BEST1O76090 585 aa9.77□□□□□ -0.85
GNE-206ENST00000543356 FBXO21O94952 628 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 166.2 ms