RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 ATG16L1Q676U5 607 aa24.72■■□□□ 1.55
SHD-201ENST00000543264 OPTNQ96CV9 577 aa24.72■■□□□ 1.55
SHD-201ENST00000543264 C7orf26Q96N11 449 aa24.72■■□□□ 1.55
SHD-201ENST00000543264 TAAR1Q96RJ0 339 aa24.72■■□□□ 1.55
SHD-201ENST00000543264 CCDC106Q9BWC9 280 aa24.72■■□□□ 1.55
SHD-201ENST00000543264 STK32BQ9NY57 414 aa24.72■■□□□ 1.55
SHD-201ENST00000543264 GOLGB1Q14789 3259 aaKnown RBP24.71■■□□□ 1.55
SHD-201ENST00000543264 TCP10L2B9ZVM9 353 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 ENTPD3O75355 529 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 JAK3P52333 1124 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 STRIP1Q5VSL9 837 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 TTC39BQ5VTQ0 682 aaPredicted RBP24.71■■□□□ 1.55
SHD-201ENST00000543264 NUDCD3Q8IVD9 361 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 TTC13Q8NBP0 860 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 MASTLQ96GX5 879 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 ZBTB45Q96K62 511 aaPredicted RBP24.71■■□□□ 1.55
SHD-201ENST00000543264 SMYD3Q9H7B4 428 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 GPAMQ9HCL2 828 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 PLLPQ9Y342 182 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 SLC4A7Q9Y6M7 1214 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 PSMA2P25787 234 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 IL1R2P27930 398 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 EIF3EP60228 445 aaKnown RBP24.71■■□□□ 1.55
SHD-201ENST00000543264 OR6Y1Q8NGX8 325 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 DTNBP1Q96EV8 351 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 CCDC28BQ9BUN5 200 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 IL1RAPL1Q9NZN1 696 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 SLC9A2Q9UBY0 812 aa24.71■■□□□ 1.55
SHD-201ENST00000543264 FKBP6O75344 327 aa24.7■■□□□ 1.55
SHD-201ENST00000543264 TSHRP16473 764 aa24.7■■□□□ 1.55
SHD-201ENST00000543264 TBXAS1P24557 533 aaPredicted RBP24.7■■□□□ 1.55
SHD-201ENST00000543264 ZBTB41Q5SVQ8 909 aa24.7■■□□□ 1.55
SHD-201ENST00000543264 FAM43BQ6ZT52 329 aaPredicted RBP24.7■■□□□ 1.55
SHD-201ENST00000543264 BBS12Q6ZW61 710 aa24.7■■□□□ 1.55
SHD-201ENST00000543264 SLC26A11Q86WA9 606 aa24.7■■□□□ 1.55
SHD-201ENST00000543264 CRLF3Q8IUI8 442 aa24.7■■□□□ 1.55
SHD-201ENST00000543264 OR5B17Q8NGF7 314 aa24.7■■□□□ 1.55
SHD-201ENST00000543264 GLIS2Q9BZE0 524 aaPredicted RBP24.7■■□□□ 1.55
SHD-201ENST00000543264 RBAKQ9NYW8 714 aaPredicted RBP24.7■■□□□ 1.55
SHD-201ENST00000543264 SERPINA10Q9UK55 444 aa24.7■■□□□ 1.55
SHD-201ENST00000543264 FEM1BQ9UK73 627 aa24.7■■□□□ 1.55
SHD-201ENST00000543264 TESPA1A2RU30 521 aaPredicted RBP24.7■■□□□ 1.54
SHD-201ENST00000543264 HARSP12081 509 aaKnown RBP24.7■■□□□ 1.54
SHD-201ENST00000543264 STIP1P31948 543 aaKnown RBP24.7■■□□□ 1.54
SHD-201ENST00000543264 RFC1P35251 1148 aaPredicted RBP24.7■■□□□ 1.54
SHD-201ENST00000543264 SLC25A3Q00325 362 aa24.7■■□□□ 1.54
SHD-201ENST00000543264 ENPEPQ07075 957 aa24.7■■□□□ 1.54
SHD-201ENST00000543264 LPCAT4Q643R3 524 aa24.7■■□□□ 1.54
SHD-201ENST00000543264 RFX6Q8HWS3 928 aa24.7■■□□□ 1.54
SHD-201ENST00000543264 TRIM42Q8IWZ5 723 aa24.7■■□□□ 1.54
SHD-201ENST00000543264 CLEC4DQ8WXI8 215 aa24.7■■□□□ 1.54
SHD-201ENST00000543264 OLFM3Q96PB7 478 aa24.7■■□□□ 1.54
SHD-201ENST00000543264 EBF4Q9BQW3 602 aa24.7■■□□□ 1.54
SHD-201ENST00000543264 C20orf27Q9GZN8 174 aa24.7■■□□□ 1.54
SHD-201ENST00000543264 C17orf75Q9HAS0 396 aa24.7■■□□□ 1.54
SHD-201ENST00000543264 S100A14Q9HCY8 104 aa24.7■■□□□ 1.54
SHD-201ENST00000543264 GABBR1Q9UBS5 961 aa24.7■■□□□ 1.54
SHD-201ENST00000543264 CNTN6Q9UQ52 1028 aa24.7■■□□□ 1.54
SHD-201ENST00000543264 TEX264Q9Y6I9 313 aa24.7■■□□□ 1.54
SHD-201ENST00000543264 A0A088AWK7 358 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 ICAM1P05362 532 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 C6orf222P0C671 652 aaPredicted RBP24.69■■□□□ 1.54
SHD-201ENST00000543264 RBP3P10745 1247 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 KDELR1P24390 212 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 PDE1BQ01064 536 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 ASPHQ12797 758 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 MED21Q13503 144 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 SFT2D3Q587I9 215 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 ACAD11Q709F0 780 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 PDSS2Q86YH6 399 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 COMMD3-BMI1R4GMX3 469 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 A6NJR5 290 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 CREB3O43889 395 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 MRPS5P82675 430 aaKnown RBP24.69■■□□□ 1.54
SHD-201ENST00000543264 HIC1Q14526 733 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 GPAT2Q6NUI2 795 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 TMEM35BQ8NCS4 154 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 FAM172AQ8WUF8 416 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 PCSK1NQ9UHG2 260 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 PPME1Q9Y570 386 aa24.69■■□□□ 1.54
SHD-201ENST00000543264 AHDC1Q5TGY3 1603 aaPredicted RBP24.69■■□□□ 1.54
SHD-201ENST00000543264 CXorf49A8MYA2 514 aaPredicted RBP24.68■■□□□ 1.54
SHD-201ENST00000543264 ZNF862O60290 1169 aa24.68■■□□□ 1.54
SHD-201ENST00000543264 SNRPAP09012 282 aaKnown RBP24.68■■□□□ 1.54
SHD-201ENST00000543264 LSAMPQ13449 338 aa24.68■■□□□ 1.54
SHD-201ENST00000543264 BMPR2Q13873 1038 aa24.68■■□□□ 1.54
SHD-201ENST00000543264 SEZ6Q53EL9 994 aa24.68■■□□□ 1.54
SHD-201ENST00000543264 ARFGAP1Q8N6T3 406 aa24.68■■□□□ 1.54
SHD-201ENST00000543264 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.68■■□□□ 1.54
SHD-201ENST00000543264 SYTL5Q8TDW5 730 aaPredicted RBP24.68■■□□□ 1.54
SHD-201ENST00000543264 HAPLN2Q9GZV7 340 aa24.68■■□□□ 1.54
SHD-201ENST00000543264 DEFB129Q9H1M3 183 aa24.68■■□□□ 1.54
SHD-201ENST00000543264 HERC5Q9UII4 1024 aaKnown RBP24.68■■□□□ 1.54
SHD-201ENST00000543264 KRT37O76014 449 aa24.68■■□□□ 1.54
SHD-201ENST00000543264 SFNP31947 248 aa24.68■■□□□ 1.54
SHD-201ENST00000543264 NCOA4Q13772 614 aa24.68■■□□□ 1.54
SHD-201ENST00000543264 CC2D2BQ6DHV5 1058 aa24.68■■□□□ 1.54
SHD-201ENST00000543264 ZCCHC23Q6ZST2 131 aa24.68■■□□□ 1.54
SHD-201ENST00000543264 DHDDSQ86SQ9 333 aa24.68■■□□□ 1.54
SHD-201ENST00000543264 WDTC1Q8N5D0 677 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms