RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 MPZL3Q6UWV2 235 aa5.51□□□□□ -1.53
CLIP1-217ENST00000543205 AGMOQ6ZNB7 445 aa5.51□□□□□ -1.53
CLIP1-217ENST00000543205 OTOP3Q7RTS5 596 aa5.51□□□□□ -1.53
CLIP1-217ENST00000543205 MRPL10Q7Z7H8 261 aaKnown RBP5.51□□□□□ -1.53
CLIP1-217ENST00000543205 DTWD1Q8N5C7 304 aa5.51□□□□□ -1.53
CLIP1-217ENST00000543205 ERCC4Q92889 916 aaPredicted RBP5.51□□□□□ -1.53
CLIP1-217ENST00000543205 CLIP3Q96DZ5 547 aa5.51□□□□□ -1.53
CLIP1-217ENST00000543205 APOL6Q9BWW8 343 aa5.51□□□□□ -1.53
CLIP1-217ENST00000543205 STRA6Q9BX79 667 aa5.51□□□□□ -1.53
CLIP1-217ENST00000543205 FGFBP2Q9BYJ0 223 aa5.51□□□□□ -1.53
CLIP1-217ENST00000543205 GTPBP4Q9BZE4 634 aaKnown RBP5.51□□□□□ -1.53
CLIP1-217ENST00000543205 CLSTN2Q9H4D0 955 aa5.51□□□□□ -1.53
CLIP1-217ENST00000543205 UBN1Q9NPG3 1134 aa5.51□□□□□ -1.53
CLIP1-217ENST00000543205 INSL6Q9Y581 213 aa5.51□□□□□ -1.53
CLIP1-217ENST00000543205 PCDHA11Q9Y5I1 949 aa5.51□□□□□ -1.53
CLIP1-217ENST00000543205 UBE4BO95155 1302 aa5.51□□□□□ -1.53
CLIP1-217ENST00000543205 TET1Q8NFU7 2136 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 FAM221AA4D161 298 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 PAGE1O75459 146 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 DGKIO75912 1065 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 B3GALT4O96024 378 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 PIGRP01833 764 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 SETSIPP0DME0 302 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 FGFR1P11362 822 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 PROZP22891 400 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 RXRGP48443 463 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 YARSP54577 528 aaKnown RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 OSTNP61366 133 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 C19orf57Q0VDD7 668 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 NOLC1Q14978 699 aaKnown RBP eCLIP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 KYAT1Q16773 422 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 KNOP1Q1ED39 458 aaKnown RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 FNDC3BQ53EP0 1204 aaKnown RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 GLB1LQ6UWU2 654 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 Q7L0L9 218 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 NELFCDQ8IXH7 590 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 THNSL1Q8IYQ7 743 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 OR8H2Q8N162 312 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 SMG8Q8ND04 991 aaKnown RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 ZNF507Q8TCN5 953 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 URGCPQ8TCY9 931 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 GPT2Q8TD30 523 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 SCFD1Q8WVM8 642 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 POMGNT1Q8WZA1 660 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 LPPQ93052 612 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 ZBTB45Q96K62 511 aaPredicted RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 MSTO1Q9BUK6 570 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 CCDC94Q9BW85 323 aaPredicted RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 CEP44Q9C0F1 390 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 TMEM117Q9H0C3 514 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 GBP3Q9H0R5 595 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 NUP62CLQ9H1M0 184 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 NXF3Q9H4D5 531 aaKnown RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 RSAD1Q9HA92 442 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 GDAQ9Y2T3 454 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 HES2Q9Y543 173 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 PCDHB5Q9Y5E4 795 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 UNC80Q8N2C7 3258 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 ANKRD63C9JTQ0 380 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 BIN1O00499 593 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 MYOGP15173 224 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 ATF7P17544 494 aaPredicted RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 LPOP22079 712 aaPredicted RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 AKAP5P24588 427 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 GATMP50440 423 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 HTRA4P83105 476 aaPredicted RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 GSTM4Q03013 218 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 PPP2R3AQ06190 1150 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 STIM1Q13586 685 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 BTG3Q14201 252 aaPredicted RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 KRT72Q14CN4 511 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 BMT2Q1RMZ1 405 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 SKOR2Q2VWA4 1001 aaPredicted RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 PAN2Q504Q3 1202 aaKnown RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 SPOUT1Q5T280 376 aaKnown RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 ZNF658Q5TYW1 1059 aaPredicted RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 HEATR6Q6AI08 1181 aaKnown RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 ISM2Q6H9L7 571 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 FAM180BQ6P0A1 224 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 ARMCX5Q6P1M9 558 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 RSRC2Q7L4I2 434 aaKnown RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 TRIM42Q8IWZ5 723 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 CMTR2Q8IYT2 770 aaKnown RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 FIBCD1Q8N539 461 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 KLHL23Q8NBE8 558 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 RBBP8NLQ8NC74 664 aaPredicted RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 KIAA0895Q8NCT3 520 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 SPATA20Q8TB22 786 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 NOC3LQ8WTT2 800 aaKnown RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 ACAP3Q96P50 834 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 MRPL9Q9BYD2 267 aaKnown RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 CDT1Q9H211 546 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 NKX2-4Q9H2Z4 354 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 TOPORSQ9NS56 1045 aaPredicted RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 INTS7Q9NVH2 962 aaKnown RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 MTMR10Q9NXD2 777 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 CGNQ9P2M7 1197 aaKnown RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 MAN1B1Q9UKM7 699 aa5.5□□□□□ -1.53
CLIP1-217ENST00000543205 AGO2Q9UKV8 859 aaKnown RBP5.5□□□□□ -1.53
CLIP1-217ENST00000543205 GIT1Q9Y2X7 761 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms