RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 ATP6AP1LQ52LC2 224 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 ARAP3Q8WWN8 1544 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 ADORA2BP29275 332 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 CNOT7Q9UIV1 285 aaKnown RBP20.01■□□□□ 0.79
HDAC4-215ENST00000543185 SLC39A10Q9ULF5 831 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 A0A0A6YYK5 440 aaPredicted RBP20.01■□□□□ 0.79
HDAC4-215ENST00000543185 NCAM2O15394 837 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 TEX28O15482 410 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 ATP6V1B2P21281 511 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 CLEC4GQ6UXB4 293 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 TMEM51Q9NW97 253 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 COMMD3-BMI1R4GMX3 469 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 C15orf38-AP3S2A0A0A6YYH1 394 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 SEC24CP53992 1094 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 TRAF2Q12933 501 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 ARPINQ7Z6K5 226 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 PCDHA10Q9Y5I2 948 aa20.01■□□□□ 0.79
HDAC4-215ENST00000543185 SRRM3A6NNA2 597 aaPredicted RBP20■□□□□ 0.79
HDAC4-215ENST00000543185 KCNMA1Q12791 1236 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 STX4Q12846 297 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 ZNF618Q5T7W0 954 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 TRMT6Q9UJA5 497 aaKnown RBP20■□□□□ 0.79
HDAC4-215ENST00000543185 LSM7Q9UK45 103 aaKnown RBP20■□□□□ 0.79
HDAC4-215ENST00000543185 RNF112Q9ULX5 631 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 PEX1O43933 1283 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 SAMD4BQ5PRF9 694 aaKnown RBP20■□□□□ 0.79
HDAC4-215ENST00000543185 PHACTR1Q9C0D0 580 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 SLC30A1Q9Y6M5 507 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 CCNA2P20248 432 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 GUCY1A2P33402 732 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 C2CD6Q53TS8 623 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 BTBD10Q9BSF8 475 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 SIK2Q9H0K1 926 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 MAPRE3Q9UPY8 281 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 CYP19A1P11511 503 aaPredicted RBP20■□□□□ 0.79
HDAC4-215ENST00000543185 RDM1Q8NG50 284 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 C9orf72Q96LT7 481 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 FAM111AQ96PZ2 611 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 THAP1Q9NVV9 213 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 LCA5LO95447 670 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 EXOC3L1Q86VI1 746 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 AADATQ8N5Z0 425 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 OR6Y1Q8NGX8 325 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 ZSWIM1Q9BR11 485 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 WDR12Q9GZL7 423 aaKnown RBP20■□□□□ 0.79
HDAC4-215ENST00000543185 TMEM117Q9H0C3 514 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 STAU2Q9NUL3 570 aaKnown RBP eCLIP20■□□□□ 0.799e-8■■■■□ 23.7
HDAC4-215ENST00000543185 ZNF608Q9ULD9 1512 aaPredicted RBP20■□□□□ 0.79
HDAC4-215ENST00000543185 MTA1Q13330 715 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 HEATR4Q86WZ0 1026 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 CCDC36Q8IYA8 594 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 FAM217BQ9NTX9 383 aaPredicted RBP20■□□□□ 0.79
HDAC4-215ENST00000543185 DRG1Q9Y295 367 aaKnown RBP20■□□□□ 0.79
HDAC4-215ENST00000543185 SYNCRIPO60506 623 aaKnown RBP20■□□□□ 0.79
HDAC4-215ENST00000543185 CYP2E1P05181 493 aaPredicted RBP20■□□□□ 0.79
HDAC4-215ENST00000543185 PDGFRAP16234 1089 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 DYNLL1P63167 89 aaKnown RBP20■□□□□ 0.79
HDAC4-215ENST00000543185 BOLA3Q53S33 107 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 SLC7A14Q8TBB6 771 aa20■□□□□ 0.79
HDAC4-215ENST00000543185 MAGEB16A2A368 324 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 CASP12Q6UXS9 341 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 KIF12Q96FN5 646 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 LOC102724428A0A0B4J2F2 783 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 LCP1P13796 627 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 GTF2H1P32780 548 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 SIK1P57059 783 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 MTDHQ86UE4 582 aaKnown RBP19.99■□□□□ 0.79
HDAC4-215ENST00000543185 TRPC4APQ8TEL6 797 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 CHP1Q99653 195 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 TMEM47Q9BQJ4 181 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 DGKIO75912 1065 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 TWF1Q12792 350 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 GDPD5Q8WTR4 605 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 EFCAB10A6NFE3 127 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 AP1S2P56377 157 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 WDR72Q3MJ13 1102 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 FAM49AQ9H0Q0 323 aaPredicted RBP19.99■□□□□ 0.79
HDAC4-215ENST00000543185 BTN3A3O00478 584 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 PRKAB2O43741 272 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 ALOX5P09917 674 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 OTOAQ7RTW8 1153 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 PEG10Q86TG7 708 aaKnown RBP19.99■□□□□ 0.79
HDAC4-215ENST00000543185 TDRD5Q8NAT2 981 aaKnown RBP19.99■□□□□ 0.79
HDAC4-215ENST00000543185 MYLK2Q9H1R3 596 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 NRDE2Q9H7Z3 1164 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 WWOXQ9NZC7 414 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 TMEM63BQ5T3F8 832 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 UBASH3BQ8TF42 649 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 TCF7L2Q9NQB0 619 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 PCSK1P29120 753 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 NT5C1AQ9BXI3 368 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 SLITRK2Q9H156 845 aa19.99■□□□□ 0.79
HDAC4-215ENST00000543185 PNPLA7Q6ZV29 1317 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 E9PBE3 544 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 RAD51BO15315 384 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 FCER1AP12319 257 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 GYS1P13807 737 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 ZCCHC8Q6NZY4 707 aaKnown RBP19.98■□□□□ 0.79
HDAC4-215ENST00000543185 COMTP21964 271 aa19.98■□□□□ 0.79
HDAC4-215ENST00000543185 MROH9Q5TGP6 573 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms