RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 SLC8A3P57103 927 aa19.44■□□□□ 0.7
COPS7A-216ENST00000543170 MEA1Q16626 185 aa19.44■□□□□ 0.7
COPS7A-216ENST00000543170 GJB7Q6PEY0 223 aa19.44■□□□□ 0.7
COPS7A-216ENST00000543170 MON1AQ86VX9 555 aa19.44■□□□□ 0.7
COPS7A-216ENST00000543170 DEPDC1BQ8WUY9 529 aa19.44■□□□□ 0.7
COPS7A-216ENST00000543170 RSAD2Q8WXG1 361 aa19.44■□□□□ 0.7
COPS7A-216ENST00000543170 TRPM5Q9NZQ8 1165 aa19.44■□□□□ 0.7
COPS7A-216ENST00000543170 HESX1Q9UBX0 185 aa19.44■□□□□ 0.7
COPS7A-216ENST00000543170 HELZP42694 1942 aaKnown RBP19.44■□□□□ 0.7
COPS7A-216ENST00000543170 BECN2A8MW95 431 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 RNF225M0QZC1 329 aaPredicted RBP19.43■□□□□ 0.7
COPS7A-216ENST00000543170 SRFP11831 508 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 APBA1Q02410 837 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 SIGLEC14Q08ET2 396 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 BST2Q10589 180 aaKnown RBP19.43■□□□□ 0.7
COPS7A-216ENST00000543170 TAF10Q12962 218 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 GOLGA7BQ2TAP0 167 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 PKDCCQ504Y2 493 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 KLHDC7AQ5VTJ3 777 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 SNX30Q5VWJ9 437 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 LCLAT1Q6UWP7 414 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 TTC30AQ86WT1 665 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 CMTM8Q8IZV2 173 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 FBXO32Q969P5 355 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 SLC46A2Q9BY10 475 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 KIF9Q9HAQ2 790 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 SLC2A4RGQ9NR83 387 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 DNAJC12Q9UKB3 198 aa19.43■□□□□ 0.7
COPS7A-216ENST00000543170 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.43■□□□□ 0.7
COPS7A-216ENST00000543170 TECTAO75443 2155 aa19.42■□□□□ 0.7
COPS7A-216ENST00000543170 ZNF840PA6NDX5 716 aa19.42■□□□□ 0.7
COPS7A-216ENST00000543170 XPO1O14980 1071 aaKnown RBP19.42■□□□□ 0.7
COPS7A-216ENST00000543170 SETSIPP0DME0 302 aa19.42■□□□□ 0.7
COPS7A-216ENST00000543170 ATP1A3P13637 1013 aa19.42■□□□□ 0.7
COPS7A-216ENST00000543170 KRT5P13647 590 aa19.42■□□□□ 0.7
COPS7A-216ENST00000543170 AVPR1AP37288 418 aa19.42■□□□□ 0.7
COPS7A-216ENST00000543170 ZNF268Q14587 947 aaPredicted RBP19.42■□□□□ 0.7
COPS7A-216ENST00000543170 CNGA2Q16280 664 aa19.42■□□□□ 0.7
COPS7A-216ENST00000543170 TANGO2Q6ICL3 276 aa19.42■□□□□ 0.7
COPS7A-216ENST00000543170 ARID3BQ8IVW6 561 aaPredicted RBP19.42■□□□□ 0.7
COPS7A-216ENST00000543170 SCAMP5Q8TAC9 235 aa19.42■□□□□ 0.7
COPS7A-216ENST00000543170 TFAP2BQ92481 460 aa19.42■□□□□ 0.7
COPS7A-216ENST00000543170 KXD1Q9BQD3 176 aa19.42■□□□□ 0.7
COPS7A-216ENST00000543170 LSM14BQ9BX40 385 aaKnown RBP19.42■□□□□ 0.7
COPS7A-216ENST00000543170 NAA15Q9BXJ9 866 aaKnown RBP19.42■□□□□ 0.7
COPS7A-216ENST00000543170 CBX8Q9HC52 389 aa19.42■□□□□ 0.7
COPS7A-216ENST00000543170 OLFM2O95897 454 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 ZDHHC11BP0C7U3 371 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 UCHL3P15374 230 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 BRD2P25440 801 aaKnown RBP19.41■□□□□ 0.7
COPS7A-216ENST00000543170 PLA2G4AP47712 749 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 TUBP50607 506 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 KIF11P52732 1056 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 ARHGAP44Q17R89 818 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 RAB41Q5JT25 222 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 TXNDC8Q6A555 127 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 GPRIN1Q7Z2K8 1008 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 MAB21L3Q8N8X9 362 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 ERGIC2Q96RQ1 377 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 ZSWIM1Q9BR11 485 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 RPP25Q9BUL9 199 aaKnown RBP19.41■□□□□ 0.7
COPS7A-216ENST00000543170 GANQ9H2C0 597 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 EPHX3Q9H6B9 360 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 AJAP1Q9UKB5 411 aaPredicted RBP19.41■□□□□ 0.7
COPS7A-216ENST00000543170 SCML2Q9UQR0 700 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 SIK3Q9Y2K2 1263 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 FHOD1Q9Y613 1164 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 USP3Q9Y6I4 520 aa19.41■□□□□ 0.7
COPS7A-216ENST00000543170 TRAV19A0A0A6YYK7 116 aa19.4■□□□□ 0.7
COPS7A-216ENST00000543170 MED7O43513 233 aa19.4■□□□□ 0.7
COPS7A-216ENST00000543170 PRAMEF12O95522 483 aa19.4■□□□□ 0.7
COPS7A-216ENST00000543170 OAS1P00973 400 aaKnown RBP19.4■□□□□ 0.7
COPS7A-216ENST00000543170 TCF3P15923 654 aa19.4■□□□□ 0.7
COPS7A-216ENST00000543170 PSMC3P17980 439 aa19.4■□□□□ 0.7
COPS7A-216ENST00000543170 GNA15P30679 374 aa19.4■□□□□ 0.7
COPS7A-216ENST00000543170 TPM4P67936 248 aa19.4■□□□□ 0.7
COPS7A-216ENST00000543170 PDE4CQ08493 712 aa19.4■□□□□ 0.7
COPS7A-216ENST00000543170 IFRD2Q12894 506 aaPredicted RBP19.4■□□□□ 0.7
COPS7A-216ENST00000543170 VITQ6UXI7 678 aa19.4■□□□□ 0.7
COPS7A-216ENST00000543170 TRIM67Q6ZTA4 783 aa19.4■□□□□ 0.7
COPS7A-216ENST00000543170 CCDC186Q7Z3E2 898 aa19.4■□□□□ 0.7
COPS7A-216ENST00000543170 PIGZQ86VD9 579 aa19.4■□□□□ 0.7
COPS7A-216ENST00000543170 CELF5Q8N6W0 485 aaKnown RBP19.4■□□□□ 0.7
COPS7A-216ENST00000543170 C1QTNF1Q9BXJ1 281 aa19.4■□□□□ 0.7
COPS7A-216ENST00000543170 COL4A2P08572 1712 aa19.39■□□□□ 0.7
COPS7A-216ENST00000543170 HEPACAM2A8MVW5 462 aa19.39■□□□□ 0.69
COPS7A-216ENST00000543170 M0QYV0 167 aa19.39■□□□□ 0.69
COPS7A-216ENST00000543170 DPYSL4O14531 572 aa19.39■□□□□ 0.69
COPS7A-216ENST00000543170 NARSO43776 548 aaKnown RBP19.39■□□□□ 0.69
COPS7A-216ENST00000543170 USP17L7P0C7H9 530 aa19.39■□□□□ 0.69
COPS7A-216ENST00000543170 VIPR2P41587 438 aa19.39■□□□□ 0.69
COPS7A-216ENST00000543170 PFKPQ01813 784 aa19.39■□□□□ 0.69
COPS7A-216ENST00000543170 UBXN1Q04323 297 aa19.39■□□□□ 0.69
COPS7A-216ENST00000543170 FCHO2Q0JRZ9 810 aa19.39■□□□□ 0.69
COPS7A-216ENST00000543170 MFSD6LQ8IWD5 586 aa19.39■□□□□ 0.69
COPS7A-216ENST00000543170 KCTD13Q8WZ19 329 aa19.39■□□□□ 0.69
COPS7A-216ENST00000543170 ASIC4Q96FT7 647 aa19.39■□□□□ 0.69
COPS7A-216ENST00000543170 PLA2G2FQ9BZM2 168 aa19.39■□□□□ 0.69
COPS7A-216ENST00000543170 SMOC2Q9H3U7 446 aa19.39■□□□□ 0.69
COPS7A-216ENST00000543170 TRPC7Q9HCX4 862 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms