RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 SMPD4Q9NXE4 827 aa12.83□□□□□ -0.36
PTPN6-220ENST00000543115 CPQQ9Y646 472 aa12.83□□□□□ -0.36
PTPN6-220ENST00000543115 GREB1Q4ZG55 1949 aa12.83□□□□□ -0.36
PTPN6-220ENST00000543115 PTPRDP23468 1912 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 ANAPC1Q9H1A4 1944 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 PRR5-ARHGAP8B1AHC4 643 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 PDXKO00764 312 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 ATG13O75143 517 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 CLSTN1O94985 981 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 NR3C1P04150 777 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 PFKLP17858 780 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 OPRD1P41143 372 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 PDE6CP51160 858 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 NDUFA8P51970 172 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 AP3M2P53677 418 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 ARHGAP8P85298 464 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 ORC1Q13415 861 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 ZACNQ401N2 412 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 C1orf220Q5T0J3 134 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 CEP68Q76N32 757 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 FILIP1Q7Z7B0 1213 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 FAM35AQ86V20 835 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 NUP93Q8N1F7 819 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 SCAMP5Q8TAC9 235 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 SPATA32Q96LK8 384 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 EHD2Q9NZN4 543 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 HMGXB4Q9UGU5 601 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 SLC8A2Q9UPR5 921 aa12.82□□□□□ -0.36
PTPN6-220ENST00000543115 CCDC163A0A0D9SF12 145 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 FAM237AA0A1B0GTK4 181 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 TNFRSF10BO14763 440 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 LRP3O75074 770 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 NFATC1O95644 943 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 RPN1P04843 607 aaKnown RBP12.81□□□□□ -0.36
PTPN6-220ENST00000543115 CYP17A1P05093 508 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 CCDC130P13994 396 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 SYKP43405 635 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 PPP3CCP48454 512 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 KRT85P78386 507 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 MESP2Q0VG99 397 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 CSRP2Q16527 193 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 FBXO43Q4G163 708 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 CEP135Q66GS9 1140 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 SPOPLQ6IQ16 392 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 PRR23CQ6ZRP0 262 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 SV2AQ7L0J3 742 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 ACOT1Q86TX2 421 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 KBTBD6Q86V97 674 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 FUKQ8N0W3 1084 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 ZMIZ2Q8NF64 920 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 GAB3Q8WWW8 586 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 SLITRK1Q96PX8 696 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.81□□□□□ -0.36
PTPN6-220ENST00000543115 USP25Q9UHP3 1055 aa12.81□□□□□ -0.36
PTPN6-220ENST00000543115 CDV3Q9UKY7 258 aaKnown RBP12.81□□□□□ -0.36
PTPN6-220ENST00000543115 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.8□□□□□ -0.36
PTPN6-220ENST00000543115 DCDC2BA2VCK2 349 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 K7EQS6 105 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 AXIN1O15169 862 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 COCHO43405 550 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 GDF9O60383 454 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 RPP40O75818 363 aaKnown RBP12.8□□□□□ -0.36
PTPN6-220ENST00000543115 BEST1O76090 585 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 YWHAQP27348 245 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 ASPAP45381 313 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 PGFP49763 221 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 SLC5A3P53794 718 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 DPYDQ12882 1025 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 NR1H3Q13133 447 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 DMC1Q14565 340 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 CCDC6Q16204 474 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 SGSM1Q2NKQ1 1148 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 SYT13Q7L8C5 426 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 SFTPA1Q8IWL2 248 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 ADGRG2Q8IZP9 1017 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 CAMKK1Q8N5S9 505 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 TMC2Q8TDI7 906 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 FBXO32Q969P5 355 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 TNIP3Q96KP6 325 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 ZFRQ96KR1 1074 aaKnown RBP12.8□□□□□ -0.36
PTPN6-220ENST00000543115 SMOQ99835 787 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 MED10Q9BTT4 135 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 GOLPH3LQ9H4A5 285 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 DMAP1Q9NPF5 467 aaPredicted RBP12.8□□□□□ -0.36
PTPN6-220ENST00000543115 KRT82Q9NSB4 513 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 IL37Q9NZH6 218 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 CFAP97Q9P2B7 532 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 CHORDC1Q9UHD1 332 aaPredicted RBP12.8□□□□□ -0.36
PTPN6-220ENST00000543115 MAPK8IP1Q9UQF2 711 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 TRAF3IP3Q9Y228 551 aa12.8□□□□□ -0.36
PTPN6-220ENST00000543115 HELZP42694 1942 aaKnown RBP12.8□□□□□ -0.36
PTPN6-220ENST00000543115 CEP250Q9BV73 2442 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 AP1G2O75843 785 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 AKAP3O75969 853 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 RHOBTB3O94955 611 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 RTN3O95197 1032 aaPredicted RBP12.79□□□□□ -0.36
PTPN6-220ENST00000543115 ASS1P00966 412 aaKnown RBP12.79□□□□□ -0.36
PTPN6-220ENST00000543115 HLA-DRAP01903 254 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 MYL1P05976 194 aa12.79□□□□□ -0.36
PTPN6-220ENST00000543115 TRIM49P0CI25 452 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms