RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 GPD1P21695 349 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 CYP2F1P24903 491 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 FLT3P36888 993 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 NDUFV1P49821 464 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 SLC8A3P57103 927 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 SNX16P57768 344 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 RASIP1Q5U651 963 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 C4orf50Q6ZRC1 276 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 ANKS3Q6ZW76 656 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 ZNF572Q7Z3I7 529 aaPredicted RBP13.94□□□□□ -0.18
CHFR-221ENST00000542714 HERC6Q8IVU3 1022 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 SP7Q8TDD2 431 aaPredicted RBP13.94□□□□□ -0.18
CHFR-221ENST00000542714 RXFP2Q8WXD0 754 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 PIK3R5Q8WYR1 880 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 NDRG1Q92597 394 aaKnown RBP13.94□□□□□ -0.18
CHFR-221ENST00000542714 ABHD8Q96I13 439 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 PBKQ96KB5 322 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 DMAP1Q9NPF5 467 aaPredicted RBP13.94□□□□□ -0.18
CHFR-221ENST00000542714 SPG21Q9NZD8 308 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 MTRRQ9UBK8 725 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 LCMT1Q9UIC8 334 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 USTQ9Y2C2 406 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 PCDHA3Q9Y5H8 950 aa13.94□□□□□ -0.18
CHFR-221ENST00000542714 TADA3O75528 432 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 SOD2P04179 222 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 PSMA2P25787 234 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 TKTL1P51854 596 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 GPR17Q13304 367 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 PIGHQ14442 188 aaPredicted RBP13.93□□□□□ -0.18
CHFR-221ENST00000542714 NFE2Q16621 373 aaPredicted RBP13.93□□□□□ -0.18
CHFR-221ENST00000542714 USP41Q3LFD5 358 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 CFAP221Q4G0U5 840 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 RAB6CQ53S08 254 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 BHLHA9Q7RTU4 235 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 RASGEF1CQ8N431 466 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 TTC9BQ8N6N2 239 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 CEP112Q8N8E3 955 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.93□□□□□ -0.18
CHFR-221ENST00000542714 UBE2Q2Q8WVN8 375 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 RIN2Q8WYP3 895 aaPredicted RBP13.93□□□□□ -0.18
CHFR-221ENST00000542714 SLC9A7Q96T83 725 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 ULBP1Q9BZM6 244 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 RAB6CQ9H0N0 254 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 LRRC4Q9HBW1 653 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 ABI2Q9NYB9 513 aaPredicted RBP13.93□□□□□ -0.18
CHFR-221ENST00000542714 SLC4A7Q9Y6M7 1214 aa13.93□□□□□ -0.18
CHFR-221ENST00000542714 CCDC66A2RUB6 948 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 LCHNA4D1U4 455 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 MTMR11A4FU01 709 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 TNFRSF10BO14763 440 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 PSTPIP1O43586 416 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 DAB1O75553 588 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 MAGEA11P43364 429 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 ZNF143P52747 638 aaPredicted RBP13.92□□□□□ -0.18
CHFR-221ENST00000542714 ARPP19P56211 112 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 DAOAP59103 153 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 RNASE9P60153 205 aaKnown RBP13.92□□□□□ -0.18
CHFR-221ENST00000542714 MRPS5P82675 430 aaKnown RBP13.92□□□□□ -0.18
CHFR-221ENST00000542714 DSG1Q02413 1049 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 ZNF211Q13398 564 aaPredicted RBP13.92□□□□□ -0.18
CHFR-221ENST00000542714 PSMD5Q16401 504 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 CCDC14Q49A88 953 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 COL13A1Q5TAT6 717 aaPredicted RBP13.92□□□□□ -0.18
CHFR-221ENST00000542714 SH3PXD2AQ5TCZ1 1133 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 TXNRD3NBQ6F5E7 133 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 AADACL2Q6P093 401 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 CC2D1AQ6P1N0 951 aaPredicted RBP13.92□□□□□ -0.18
CHFR-221ENST00000542714 RNF19BQ6ZMZ0 732 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 HFE2Q6ZVN8 426 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 ARCQ7LC44 396 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 DDX53Q86TM3 631 aaKnown RBP13.92□□□□□ -0.18
CHFR-221ENST00000542714 SIX6OS1Q8N1H7 587 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 FIBCD1Q8N539 461 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 UBL4BQ8N7F7 174 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 TMEM169Q96HH4 297 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 FUBP3Q96I24 572 aaKnown RBP eCLIP13.92□□□□□ -0.18
CHFR-221ENST00000542714 PGLYRP2Q96PD5 576 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 CNPY3Q9BT09 278 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 C11orf84Q9BUA3 381 aaPredicted RBP13.92□□□□□ -0.18
CHFR-221ENST00000542714 OXCT2Q9BYC2 517 aaPredicted RBP13.92□□□□□ -0.18
CHFR-221ENST00000542714 ADAM33Q9BZ11 813 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 CARD9Q9H257 536 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 CRISPLD1Q9H336 500 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 PNPLA8Q9NP80 782 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 ASNSD1Q9NWL6 643 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 PCDHB5Q9Y5E4 795 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 BACE2Q9Y5Z0 518 aa13.92□□□□□ -0.18
CHFR-221ENST00000542714 CEP104O60308 925 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 LRCH4O75427 683 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 FBXO21O94952 628 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 CPB1P15086 417 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 PDGFRAP16234 1089 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 RPL17P18621 184 aaKnown RBP13.91□□□□□ -0.18
CHFR-221ENST00000542714 TFE3P19532 575 aaPredicted RBP13.91□□□□□ -0.18
CHFR-221ENST00000542714 GTF2F1P35269 517 aaKnown RBP eCLIP13.91□□□□□ -0.18
CHFR-221ENST00000542714 GLUD2P49448 558 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 GPR15P49685 360 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 TERF1P54274 439 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 SLC25A11Q02978 314 aaKnown RBP13.91□□□□□ -0.18
CHFR-221ENST00000542714 CKAP4Q07065 602 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms