RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 SH3PXD2BA1X283 911 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 ZNF233A6NK53 670 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 PLA2G6O60733 806 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 INMTO95050 263 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 EIF2S1P05198 315 aaKnown RBP11.58□□□□□ -0.56
CDH3-203ENST00000542274 ICAM1P05362 532 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 CPA3P15088 417 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 DRD4P21917 467 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 GFPT1Q06210 699 aaPredicted RBP11.58□□□□□ -0.56
CDH3-203ENST00000542274 SF3A3Q12874 501 aaKnown RBP eCLIP11.58□□□□□ -0.56
CDH3-203ENST00000542274 BTBD8Q5XKL5 378 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 FAM47EQ6ZV65 393 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 RIN3Q8TB24 985 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 RSAD2Q8WXG1 361 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 EFHD2Q96C19 240 aaPredicted RBP11.58□□□□□ -0.56
CDH3-203ENST00000542274 CDCA5Q96FF9 252 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 CAPZA3Q96KX2 299 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 PHF12Q96QT6 1004 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 CCDC77Q9BR77 488 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 SPC25Q9HBM1 224 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 EVLQ9UI08 416 aaPredicted RBP11.58□□□□□ -0.56
CDH3-203ENST00000542274 PLAGL2Q9UPG8 496 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 MRPL11Q9Y3B7 192 aaKnown RBP11.58□□□□□ -0.56
CDH3-203ENST00000542274 PITPNM2Q9BZ72 1349 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 SIGLEC16A6NMB1 481 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 ZNF185O15231 689 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 AKAP3O75969 853 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 UBOX5O94941 541 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 TCF3P15923 654 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 BCAP31P51572 246 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 PPP2R5CQ13362 524 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 PDAP1Q13442 181 aaKnown RBP11.58□□□□□ -0.56
CDH3-203ENST00000542274 DSC3Q14574 896 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 PTPROQ16827 1216 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 TRIM59Q8IWR1 403 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.58□□□□□ -0.56
CDH3-203ENST00000542274 CLEC4DQ8WXI8 215 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 RAPGEF5Q92565 580 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 DHX38Q92620 1227 aaKnown RBP11.58□□□□□ -0.56
CDH3-203ENST00000542274 IQCDQ96DY2 449 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 COX4I2Q96KJ9 171 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 SPACA7Q96KW9 195 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 CTRCQ99895 268 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.58□□□□□ -0.56
CDH3-203ENST00000542274 PLEKHA5Q9HAU0 1116 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 SLC38A10Q9HBR0 1119 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 SALL4Q9UJQ4 1053 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 SLC8A2Q9UPR5 921 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 RIPK3Q9Y572 518 aa11.58□□□□□ -0.56
CDH3-203ENST00000542274 ASTN1O14525 1302 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 A0A1W2PRQ8 180 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 A6NL46 340 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 PFDN6O15212 129 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 YKT6O15498 198 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 IDH3BO43837 385 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 GNRH1P01148 92 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 EIF2AK2P19525 551 aaKnown RBP11.57□□□□□ -0.56
CDH3-203ENST00000542274 SLC9A1P19634 815 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 BRDTQ58F21 947 aaPredicted RBP11.57□□□□□ -0.56
CDH3-203ENST00000542274 DCAF17Q5H9S7 520 aaPredicted RBP11.57□□□□□ -0.56
CDH3-203ENST00000542274 ARMC4Q5T2S8 1044 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 ELMOD1Q8N336 334 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 SLC5A5Q92911 643 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 VPS35Q96QK1 796 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 PSMB7Q99436 277 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 RNF38Q9H0F5 515 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 CAPN6Q9Y6Q1 641 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 EPN2O95208 641 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 GTF2H1P32780 548 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 ARHGDIBP52566 201 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 TMPRSS15P98073 1019 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 AMPD2Q01433 879 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 KCNH2Q12809 1159 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 KCNJ8Q15842 424 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 KNOP1Q1ED39 458 aaKnown RBP11.57□□□□□ -0.56
CDH3-203ENST00000542274 B3GNT6Q6ZMB0 384 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 EPM2AIP1Q7L775 607 aaPredicted RBP11.57□□□□□ -0.56
CDH3-203ENST00000542274 PRPF31Q8WWY3 499 aaKnown RBP11.57□□□□□ -0.56
CDH3-203ENST00000542274 OTUD5Q96G74 571 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 TAAR1Q96RJ0 339 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 MMS19Q96T76 1030 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 WNT8AQ9H1J5 351 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 ARMC7Q9H6L4 198 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 PIH1D1Q9NWS0 290 aaKnown RBP11.57□□□□□ -0.56
CDH3-203ENST00000542274 TRNAU1APQ9NX07 287 aaKnown RBP11.57□□□□□ -0.56
CDH3-203ENST00000542274 TCEAL9Q9UHQ7 104 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 VPS51Q9UID3 782 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 AFG3L2Q9Y4W6 797 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 PCDHB13Q9Y5F0 798 aa11.57□□□□□ -0.56
CDH3-203ENST00000542274 CENPFP49454 3210 aa11.56□□□□□ -0.56
CDH3-203ENST00000542274 A0A1W2PQJ5 194 aa11.56□□□□□ -0.56
CDH3-203ENST00000542274 GLTPD2A6NH11 291 aa11.56□□□□□ -0.56
CDH3-203ENST00000542274 TISP43B9A030 160 aa11.56□□□□□ -0.56
CDH3-203ENST00000542274 VWA5AO00534 786 aa11.56□□□□□ -0.56
CDH3-203ENST00000542274 SORBS3O60504 671 aa11.56□□□□□ -0.56
CDH3-203ENST00000542274 EYA4O95677 639 aa11.56□□□□□ -0.56
CDH3-203ENST00000542274 RARBP10826 455 aa11.56□□□□□ -0.56
CDH3-203ENST00000542274 CYLC1P35663 651 aaPredicted RBP11.56□□□□□ -0.56
CDH3-203ENST00000542274 SLC1A1P43005 524 aa11.56□□□□□ -0.56
CDH3-203ENST00000542274 MRPS9P82933 396 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms