RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 ARID3BQ8IVW6 561 aaPredicted RBP16.01■□□□□ 0.15
CNOT9-208ENST00000542068 PGAP2Q9UHJ9 254 aa16.01■□□□□ 0.15
CNOT9-208ENST00000542068 MEI4A8MW99 385 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 KBTBD13C9JR72 458 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 MMP8P22894 467 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 SLFN12LQ6IEE8 588 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 SLC30A9Q6PML9 568 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 CEP128Q6ZU80 1094 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 PPIL6Q8IXY8 311 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 TFAP2BQ92481 460 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 THTPAQ9BU02 230 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 PCDH9Q9HC56 1237 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 PAPOLBQ9NRJ5 636 aaKnown RBP16■□□□□ 0.15
CNOT9-208ENST00000542068 CISHQ9NSE2 258 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 SLC24A2Q9UI40 661 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 CSADQ9Y600 493 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 TOP3BO95985 862 aaKnown RBP16■□□□□ 0.15
CNOT9-208ENST00000542068 SP100P23497 879 aaPredicted RBP16■□□□□ 0.15
CNOT9-208ENST00000542068 EIF3EP60228 445 aaKnown RBP16■□□□□ 0.15
CNOT9-208ENST00000542068 TMPRSS15P98073 1019 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 PSMD6Q15008 389 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 R3HDM1Q15032 1099 aaKnown RBP16■□□□□ 0.15
CNOT9-208ENST00000542068 RASA2Q15283 850 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 CTC1Q2NKJ3 1217 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 EFHC2Q5JST6 749 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 DARS2Q6PI48 645 aaKnown RBP16■□□□□ 0.15
CNOT9-208ENST00000542068 LRRC74BQ6ZQY2 392 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 PHF13Q86YI8 300 aaPredicted RBP16■□□□□ 0.15
CNOT9-208ENST00000542068 CCNJLQ8IV13 435 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 FBXO16Q8IX29 292 aaPredicted RBP16■□□□□ 0.15
CNOT9-208ENST00000542068 PPFIBP2Q8ND30 876 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 PORCNQ9H237 461 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 C17orf75Q9HAS0 396 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 E2F8A0AVK6 867 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 MAFGO15525 162 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 RBP3P10745 1247 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 AP1ARQ63HQ0 302 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 CATSPERGQ6ZRH7 1159 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 CDHR3Q6ZTQ4 885 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 PRPF39Q86UA1 669 aaKnown RBP16■□□□□ 0.15
CNOT9-208ENST00000542068 ZBTB8OSQ8IWT0 167 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 TEX9Q8N6V9 391 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 ZNF333Q96JL9 665 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 NTPCRQ9BSD7 190 aaKnown RBP16■□□□□ 0.15
CNOT9-208ENST00000542068 SMYD3Q9H7B4 428 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 SHOC2Q9UQ13 582 aa16■□□□□ 0.15
CNOT9-208ENST00000542068 TRIM49D1C9J1S8 452 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 H0YCG3 227 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 H7C0C1 242 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 PSMG1O95456 288 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 PRKCBP05771 671 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 ATP5OP48047 213 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 NEK3P51956 506 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 SNRPFP62306 86 aaKnown RBP15.99■□□□□ 0.15
CNOT9-208ENST00000542068 MRPS35P82673 323 aaKnown RBP15.99■□□□□ 0.15
CNOT9-208ENST00000542068 C1QBPQ07021 282 aaKnown RBP15.99■□□□□ 0.15
CNOT9-208ENST00000542068 RAB6CQ53S08 254 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 DENND1BQ6P3S1 775 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 TDRPQ86YL5 185 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 MTMR14Q8NCE2 650 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 SHKBP1Q8TBC3 707 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 RAB6CQ9H0N0 254 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 MYH9P35579 1960 aaKnown RBP15.99■□□□□ 0.15
CNOT9-208ENST00000542068 SPATA31C2B4DYI2 1134 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 UGT1A9O60656 530 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 PSMC1P62191 440 aaKnown RBP15.99■□□□□ 0.15
CNOT9-208ENST00000542068 RELL1Q8IUW5 271 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 BANPQ8N9N5 519 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 TMEM35BQ8NCS4 154 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 UBA3Q8TBC4 463 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 DCAKDQ8WVC6 231 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 UGT1A7Q9HAW7 530 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 UGT1A10Q9HAW8 530 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 UGT1A8Q9HAW9 530 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 SCOCQ9UIL1 159 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 AFG3L2Q9Y4W6 797 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 COPEO14579 308 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 CXCL8P10145 99 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 KRT3P12035 628 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 CCNG1P51959 295 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 TRIM72Q6ZMU5 477 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 C15orf39Q6ZRI6 1047 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 EFCAB3Q8N7B9 438 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 SPATA18Q8TC71 538 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 SPATA33Q96N06 139 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 FOXP3Q9BZS1 431 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 CYLDQ9NQC7 956 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 BTBD7Q9P203 1132 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 HEY1Q9Y5J3 304 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 MAD1L1Q9Y6D9 718 aa15.99■□□□□ 0.15
CNOT9-208ENST00000542068 ADM5C9JUS6 153 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 SKIP12755 728 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 NAMPTP43490 491 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 DUOXA2Q1HG44 320 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 TMEM192Q8IY95 271 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 KIAA0319LQ8IZA0 1049 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 ACSS3Q9H6R3 686 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 TCRBV9S1A1TA0A576 114 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 MAP3K7O43318 606 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 ZC3H11AO75152 810 aaKnown RBP eCLIP15.98■□□□□ 0.159e-8■■□□□ 13
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms