RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 TRNP1Q6NT89 227 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 MAMDC4Q6UXC1 1216 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 FITM2Q8N6M3 262 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 FAM71DQ8N9W8 422 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 UBA3Q8TBC4 463 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 SPATA18Q8TC71 538 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 EMID1Q96A84 441 aaPredicted RBP13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 PPP1R16BQ96T49 567 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 CALN1Q9BXU9 219 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 GGT7Q9UJ14 662 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 CITO14578 2027 aa13.87□□□□□ -0.19
PRKAB1-206ENST00000541640 A0A1W2PPM1 405 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 RBM47A0AV96 593 aaKnown RBP13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 TSPAN1O60635 241 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 RPA3P35244 121 aaPredicted RBP13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 MGAT5Q09328 741 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 TTLL12Q14166 644 aaPredicted RBP13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 STILQ15468 1287 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 FAM47CQ5HY64 1035 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 GJC2Q5T442 439 aaPredicted RBP13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 MTHFD1LQ6UB35 978 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 C3orf62Q6ZUJ4 267 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 FAM183BPQ6ZVS7 135 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 FAM228AQ86W67 206 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 PDIK1LQ8N165 341 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 C4orf33Q8N1A6 199 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 FBXO36Q8NEA4 188 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 RXFP2Q8WXD0 754 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 RMDN2Q96LZ7 410 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 ACAP3Q96P50 834 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 PAIP2Q9BPZ3 127 aaKnown RBP13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 NT5C1AQ9BXI3 368 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 MAK16Q9BXY0 300 aaKnown RBP13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 ECT2Q9H8V3 914 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 CD248Q9HCU0 757 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 VTA1Q9NP79 307 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 XPO7Q9UIA9 1087 aaKnown RBP13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 TSPAN16Q9UKR8 245 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 A0A1B0GUA9 196 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 TCRBV7S3A2A0A539 114 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 IQCA1LA6NCM1 817 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 PFKMP08237 780 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 CA4P22748 312 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 CDH6P55285 790 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 ROR1Q01973 937 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 RNASELQ05823 741 aaKnown RBP13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 CBLBQ13191 982 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 RIPK1Q13546 671 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 TFDP2Q14188 446 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 ZNF792Q3KQV3 632 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 SH3PXD2AQ5TCZ1 1133 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 ECHDC2Q86YB7 292 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 FBF1Q8TES7 1133 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 PAFAH2Q99487 392 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 C16orf70Q9BSU1 422 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 GBA2Q9HCG7 927 aaPredicted RBP13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 GRID1Q9ULK0 1009 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 RALGAPA2Q2PPJ7 1873 aa13.86□□□□□ -0.19
PRKAB1-206ENST00000541640 PLXNB2O15031 1838 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 E5RJQ4 531 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 DPYSL4O14531 572 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 ZWINTO95229 277 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 PDGFRAP16234 1089 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 MMRN1Q13201 1228 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 SLC1A5Q15758 541 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 OR6B2Q6IFH4 312 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 FAM47EQ6ZV65 393 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 TBC1D1Q86TI0 1168 aaPredicted RBP13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 PALM2Q8IXS6 379 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 MZB1Q8WU39 189 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 GTF3C2Q8WUA4 911 aaPredicted RBP13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 PHTF1Q9UMS5 762 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 NQO1P15559 274 aaKnown RBP13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 ATP2A2P16615 1042 aaKnown RBP13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 GRM5P41594 1212 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 SKIV2L2P42285 1042 aaKnown RBP13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 BASP1P80723 227 aaKnown RBP13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 DNAJC3Q13217 504 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 EFTUD2Q15029 972 aaKnown RBP eCLIP13.85□□□□□ -0.192e-9■■■■■ 31.8
PRKAB1-206ENST00000541640 PDK2Q15119 407 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 BBS9Q3SYG4 887 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 DARS2Q6PI48 645 aaKnown RBP13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 NPNTQ6UXI9 565 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 AFG1LQ8WV93 481 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 DCAKDQ8WVC6 231 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 NLRP7Q8WX94 980 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 USP6NLQ92738 828 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 MRRFQ96E11 262 aaKnown RBP13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 RNF157Q96PX1 679 aa13.85□□□□□ -0.19
PRKAB1-206ENST00000541640 SCN4AP35499 1836 aa13.84□□□□□ -0.19
PRKAB1-206ENST00000541640 PRPSAP2O60256 369 aa13.84□□□□□ -0.19
PRKAB1-206ENST00000541640 EDF1O60869 148 aaKnown RBP13.84□□□□□ -0.19
PRKAB1-206ENST00000541640 ATP6V1G2O95670 118 aa13.84□□□□□ -0.19
PRKAB1-206ENST00000541640 ZNF286BP0CG31 522 aa13.84□□□□□ -0.19
PRKAB1-206ENST00000541640 KRT4P19013 534 aa13.84□□□□□ -0.19
PRKAB1-206ENST00000541640 KCNJ11Q14654 390 aa13.84□□□□□ -0.19
PRKAB1-206ENST00000541640 C15orf59Q2T9L4 293 aaPredicted RBP13.84□□□□□ -0.19
PRKAB1-206ENST00000541640 PKDCCQ504Y2 493 aa13.84□□□□□ -0.19
PRKAB1-206ENST00000541640 RAB6CQ53S08 254 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms