RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 SH3TC2Q8TF17 1288 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 STMN2Q93045 179 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 TWNKQ96RR1 684 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 PDGFDQ9GZP0 370 aaPredicted RBP10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 TLE6Q9H808 572 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 STOML1Q9UBI4 398 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 LNPEPQ9UIQ6 1025 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 HEY1Q9Y5J3 304 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 STAM2O75886 525 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 DGAT1O75907 488 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 INHBAP08476 426 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 KRT3P12035 628 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 CD1EP15812 388 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 GRIA1P42261 906 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 CACNA2D1P54289 1103 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 PSMC1P62191 440 aaKnown RBP10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 SARNPP82979 210 aaKnown RBP10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 CHI3L2Q15782 390 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 MROH9Q5TGP6 573 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 SNRNP48Q6IEG0 339 aaKnown RBP10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 SLC30A9Q6PML9 568 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 LRRC71Q8N4P6 559 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 KCTD6Q8NC69 237 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 CCDC124Q96CT7 223 aaKnown RBP10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 PCMTD2Q9NV79 361 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 SENP1Q9P0U3 644 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 THSD7AQ9UPZ6 1657 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 BRCA2P51587 3418 aa10.82□□□□□ -0.68
CDC42SE1-207ENST00000540998 COL4A5P29400 1685 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 PRR5-ARHGAP8B1AHC4 643 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 ZC3H11AO75152 810 aaKnown RBP eCLIP10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 STK10O94804 968 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 ERBB2P04626 1255 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 ASNSP08243 561 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 KDELR1P24390 212 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 CRADDP78560 199 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 ARHGAP8P85298 464 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 TMPRSS15P98073 1019 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 SLC34A1Q06495 639 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 RSBN1LQ6PCB5 846 aaPredicted RBP10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 RIPOR1Q6ZS17 1223 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 VSIG10LQ86VR7 867 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 TRIM50Q86XT4 487 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 PDIK1LQ8N165 341 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 MPP5Q8N3R9 675 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 CFAP61Q8NHU2 1237 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 UBA3Q8TBC4 463 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 PYDC1Q8WXC3 89 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 PANX3Q96QZ0 392 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 DHRS4Q9BTZ2 278 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 IMPG2Q9BZV3 1241 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 SYNCQ9H7C4 482 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 PLAC1Q9HBJ0 212 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 RAB6BQ9NRW1 208 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 IKBKGQ9Y6K9 419 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 ZNF646O15015 1829 aaPredicted RBP10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 ZMPSTE24O75844 475 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 RARBP10826 455 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 MIPP30301 263 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 SFNP31947 248 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 PAPOLAP51003 745 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 AQP5P55064 265 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 SNRPFP62306 86 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 CLDN10P78369 228 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 MRPS35P82673 323 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 MRPS5P82675 430 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 DPYSL3Q14195 570 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 CCDC62Q6P9F0 684 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 DARS2Q6PI48 645 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 IZUMO2Q6UXV1 221 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 NIPA1Q7RTP0 329 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 POLNQ7Z5Q5 900 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 LARGE2Q8N3Y3 721 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 GSTCDQ8NEC7 633 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 ATP6V0A1Q93050 837 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 CGRRF1Q99675 332 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 NFASCO94856 1347 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 PDE5AO76074 875 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 PHBP35232 272 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 ZNF132P52740 706 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 TGFB2P61812 414 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 ZNF200P98182 395 aaPredicted RBP10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 SLC25A3Q00325 362 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 TRNP1Q6NT89 227 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 ATG14Q6ZNE5 492 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 RSPH3Q86UC2 560 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 TMEM35BQ8NCS4 154 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 FBXO41Q8TF61 875 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 MOCOSQ96EN8 888 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 APOPT1Q96IL0 206 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 TUBGCP5Q96RT8 1024 aa10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 DRG1Q9Y295 367 aaKnown RBP10.81□□□□□ -0.68
CDC42SE1-207ENST00000540998 A0A0B4J269 797 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 H7C0C1 242 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 COPEO14579 308 aa10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 LIN7AO14910 233 aaPredicted RBP10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 ASS1P00966 412 aaKnown RBP10.8□□□□□ -0.68
CDC42SE1-207ENST00000540998 CSH1P0DML2 217 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms