RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 PALM2-AKAP2B1ALY0 433 aaPredicted RBP28.6■■■□□ 2.17
CHFR-218ENST00000540963 UPK3BL2E5RIL1 263 aa28.6■■■□□ 2.17
CHFR-218ENST00000540963 KAT7O95251 611 aa28.6■■■□□ 2.17
CHFR-218ENST00000540963 FAM163BP0C2L3 166 aa28.6■■■□□ 2.17
CHFR-218ENST00000540963 TXLNAP40222 546 aa28.6■■■□□ 2.17
CHFR-218ENST00000540963 TNFRSF4P43489 277 aa28.6■■■□□ 2.17
CHFR-218ENST00000540963 CASP5P51878 434 aa28.6■■■□□ 2.17
CHFR-218ENST00000540963 USP46P62068 366 aa28.6■■■□□ 2.17
CHFR-218ENST00000540963 PSMC1P62191 440 aaKnown RBP28.6■■■□□ 2.17
CHFR-218ENST00000540963 SLC23A3Q6PIS1 610 aa28.6■■■□□ 2.17
CHFR-218ENST00000540963 ALLCQ8N6M5 410 aa28.6■■■□□ 2.17
CHFR-218ENST00000540963 TXNDC5Q8NBS9 432 aaKnown RBP28.6■■■□□ 2.17
CHFR-218ENST00000540963 RNF38Q9H0F5 515 aa28.6■■■□□ 2.17
CHFR-218ENST00000540963 TBC1D14Q9P2M4 693 aa28.6■■■□□ 2.17
CHFR-218ENST00000540963 ATRXP46100 2492 aa28.6■■■□□ 2.17
CHFR-218ENST00000540963 MAP3K13O43283 966 aa28.59■■■□□ 2.17
CHFR-218ENST00000540963 ADH1CP00326 375 aa28.59■■■□□ 2.17
CHFR-218ENST00000540963 OAS1P00973 400 aaKnown RBP28.59■■■□□ 2.17
CHFR-218ENST00000540963 TNNC2P02585 160 aa28.59■■■□□ 2.17
CHFR-218ENST00000540963 HNRNPLP14866 589 aaKnown RBP eCLIP28.59■■■□□ 2.17
CHFR-218ENST00000540963 KIR2DL1P43626 348 aaPredicted RBP28.59■■■□□ 2.17
CHFR-218ENST00000540963 CYP27A1Q02318 531 aa28.59■■■□□ 2.17
CHFR-218ENST00000540963 DUOXA2Q1HG44 320 aa28.59■■■□□ 2.17
CHFR-218ENST00000540963 UAP1L1Q3KQV9 507 aa28.59■■■□□ 2.17
CHFR-218ENST00000540963 PEAR1Q5VY43 1037 aaPredicted RBP28.59■■■□□ 2.17
CHFR-218ENST00000540963 KCNV2Q8TDN2 545 aa28.59■■■□□ 2.17
CHFR-218ENST00000540963 PCED1BQ96HM7 432 aa28.59■■■□□ 2.17
CHFR-218ENST00000540963 FNBP1Q96RU3 617 aa28.59■■■□□ 2.17
CHFR-218ENST00000540963 NEUROG3Q9Y4Z2 214 aa28.59■■■□□ 2.17
CHFR-218ENST00000540963 CPQQ9Y646 472 aa28.59■■■□□ 2.17
CHFR-218ENST00000540963 BAHCC1Q9P281 2608 aa28.59■■■□□ 2.17
CHFR-218ENST00000540963 GON4LQ3T8J9 2241 aa28.58■■■□□ 2.17
CHFR-218ENST00000540963 KLF8O95600 359 aaPredicted RBP28.58■■■□□ 2.17
CHFR-218ENST00000540963 SPINK2P20155 84 aa28.58■■■□□ 2.17
CHFR-218ENST00000540963 GRIA2P42262 883 aa28.58■■■□□ 2.17
CHFR-218ENST00000540963 RESTQ13127 1097 aa28.58■■■□□ 2.17
CHFR-218ENST00000540963 DEFB124Q8NES8 71 aa28.58■■■□□ 2.17
CHFR-218ENST00000540963 OTUB2Q96DC9 234 aa28.58■■■□□ 2.17
CHFR-218ENST00000540963 FAM84AQ96KN4 292 aa28.58■■■□□ 2.17
CHFR-218ENST00000540963 PCIF1Q9H4Z3 704 aa28.58■■■□□ 2.17
CHFR-218ENST00000540963 SRPRBQ9Y5M8 271 aaKnown RBP28.58■■■□□ 2.17
CHFR-218ENST00000540963 CEP192Q8TEP8 1941 aa28.58■■■□□ 2.17
CHFR-218ENST00000540963 ANTXRLA6NF34 631 aa28.57■■■□□ 2.16
CHFR-218ENST00000540963 ZNF233A6NK53 670 aa28.57■■■□□ 2.16
CHFR-218ENST00000540963 SGK1O00141 431 aa28.57■■■□□ 2.16
CHFR-218ENST00000540963 IDEP14735 1019 aa28.57■■■□□ 2.16
CHFR-218ENST00000540963 TIE1P35590 1138 aa28.57■■■□□ 2.16
CHFR-218ENST00000540963 PREPLQ4J6C6 727 aaPredicted RBP28.57■■■□□ 2.16
CHFR-218ENST00000540963 RHBDF2Q6PJF5 856 aa28.57■■■□□ 2.16
CHFR-218ENST00000540963 CCDC73Q6ZRK6 1079 aa28.57■■■□□ 2.16
CHFR-218ENST00000540963 TTC30AQ86WT1 665 aa28.57■■■□□ 2.16
CHFR-218ENST00000540963 OR5B17Q8NGF7 314 aa28.57■■■□□ 2.16
CHFR-218ENST00000540963 SLITRK1Q96PX8 696 aa28.57■■■□□ 2.16
CHFR-218ENST00000540963 DUSP9Q99956 384 aaKnown RBP28.57■■■□□ 2.16
CHFR-218ENST00000540963 FBXO2Q9UK22 296 aaPredicted RBP28.57■■■□□ 2.16
CHFR-218ENST00000540963 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa28.56■■■□□ 2.16
CHFR-218ENST00000540963 F8VP50 259 aa28.56■■■□□ 2.16
CHFR-218ENST00000540963 TACC1O75410 805 aa28.56■■■□□ 2.16
CHFR-218ENST00000540963 TOP3BO95985 862 aaKnown RBP28.56■■■□□ 2.16
CHFR-218ENST00000540963 SLC6A11P48066 632 aa28.56■■■□□ 2.16
CHFR-218ENST00000540963 MAP7D1Q3KQU3 841 aa28.56■■■□□ 2.16
CHFR-218ENST00000540963 TDRD10Q5VZ19 366 aaKnown RBP28.56■■■□□ 2.16
CHFR-218ENST00000540963 LYSMD4Q5XG99 296 aa28.56■■■□□ 2.16
CHFR-218ENST00000540963 STXBP4Q6ZWJ1 553 aa28.56■■■□□ 2.16
CHFR-218ENST00000540963 WDR49Q8IV35 697 aa28.56■■■□□ 2.16
CHFR-218ENST00000540963 TMEFF1Q8IYR6 380 aa28.56■■■□□ 2.16
CHFR-218ENST00000540963 CEP76Q8TAP6 659 aa28.56■■■□□ 2.16
CHFR-218ENST00000540963 RLN3Q8WXF3 142 aa28.56■■■□□ 2.16
CHFR-218ENST00000540963 KIAA1586Q9HCI6 787 aa28.56■■■□□ 2.16
CHFR-218ENST00000540963 ARHGEF4Q9NR80 690 aa28.56■■■□□ 2.16
CHFR-218ENST00000540963 PANK4Q9NVE7 773 aa28.56■■■□□ 2.16
CHFR-218ENST00000540963 BCCIPQ9P287 314 aaKnown RBP eCLIP28.56■■■□□ 2.16
CHFR-218ENST00000540963 PILRBQ9UKJ0 227 aa28.56■■■□□ 2.16
CHFR-218ENST00000540963 PTPRJQ12913 1337 aa28.55■■■□□ 2.16
CHFR-218ENST00000540963 E2F8A0AVK6 867 aa28.55■■■□□ 2.16
CHFR-218ENST00000540963 PDGFRBP09619 1106 aa28.55■■■□□ 2.16
CHFR-218ENST00000540963 ADH5P11766 374 aa28.55■■■□□ 2.16
CHFR-218ENST00000540963 ENGP17813 658 aa28.55■■■□□ 2.16
CHFR-218ENST00000540963 PTGER3P43115 390 aa28.55■■■□□ 2.16
CHFR-218ENST00000540963 TAF10Q12962 218 aa28.55■■■□□ 2.16
CHFR-218ENST00000540963 SEMA3BQ13214 749 aa28.55■■■□□ 2.16
CHFR-218ENST00000540963 PIP4P1Q86T03 277 aa28.55■■■□□ 2.16
CHFR-218ENST00000540963 NOC3LQ8WTT2 800 aaKnown RBP28.55■■■□□ 2.16
CHFR-218ENST00000540963 MMS19Q96T76 1030 aa28.55■■■□□ 2.16
CHFR-218ENST00000540963 ELOVL4Q9GZR5 314 aa28.55■■■□□ 2.16
CHFR-218ENST00000540963 TMEM74BQ9NUR3 256 aa28.55■■■□□ 2.16
CHFR-218ENST00000540963 CFAP97Q9P2B7 532 aa28.55■■■□□ 2.16
CHFR-218ENST00000540963 MBD1Q9UIS9 605 aaPredicted RBP28.55■■■□□ 2.16
CHFR-218ENST00000540963 AKAP13Q12802 2813 aa28.55■■■□□ 2.16
CHFR-218ENST00000540963 SRRM3A6NNA2 597 aaPredicted RBP28.54■■■□□ 2.16
CHFR-218ENST00000540963 GNL1P36915 607 aaPredicted RBP28.54■■■□□ 2.16
CHFR-218ENST00000540963 TRMT11Q7Z4G4 463 aaKnown RBP28.54■■■□□ 2.16
CHFR-218ENST00000540963 RABEPKQ7Z6M1 372 aa28.54■■■□□ 2.16
CHFR-218ENST00000540963 PDZD8Q8NEN9 1154 aa28.54■■■□□ 2.16
CHFR-218ENST00000540963 OVCA2Q8WZ82 227 aa28.54■■■□□ 2.16
CHFR-218ENST00000540963 SMPD4Q9NXE4 827 aa28.54■■■□□ 2.16
CHFR-218ENST00000540963 MSRB2Q9Y3D2 182 aa28.54■■■□□ 2.16
CHFR-218ENST00000540963 CLIC4Q9Y696 253 aa28.54■■■□□ 2.16
CHFR-218ENST00000540963 AP5Z1O43299 807 aa28.53■■■□□ 2.16
CHFR-218ENST00000540963 ADAM23O75077 832 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms