RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 OSTM1Q86WC4 334 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 ERICH1Q86X53 443 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 CRYBG2Q8N1P7 616 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 B3GALNT2Q8NCR0 500 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 TMEM35BQ8NCS4 154 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 MSANTD4Q8NCY6 345 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 UBA3Q8TBC4 463 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 SPATA18Q8TC71 538 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 KBTBD7Q8WVZ9 684 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 CTNNBL1Q8WYA6 563 aaPredicted RBP7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 TFAP2BQ92481 460 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 DDX1Q92499 740 aaKnown RBP7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 TMEM169Q96HH4 297 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 PPP1R13BQ96KQ4 1090 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 NOX5Q96PH1 765 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 SYT15Q9BQS2 421 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 SYT11Q9BT88 431 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 OXCT2Q9BYC2 517 aaPredicted RBP7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 TSGA10Q9BZW7 698 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 DPEP3Q9H4B8 488 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 FAM49BQ9NUQ9 324 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 SPG21Q9NZD8 308 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 MSRAQ9UJ68 235 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 GDF2Q9UK05 429 aaPredicted RBP7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 CDH9Q9ULB4 789 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 TFR2Q9UP52 801 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 REXO2Q9Y3B8 237 aaKnown RBP7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 PCDHB12Q9Y5F1 795 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 PCDHA11Q9Y5I1 949 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 MRPL42Q9Y6G3 142 aaKnown RBP7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 PTPRSQ13332 1948 aa7.03□□□□□ -1.28
CLTCL1-206ENST00000540896 SF3B1O75533 1304 aaKnown RBP eCLIP7.02□□□□□ -1.28
CLTCL1-206ENST00000540896 CITO14578 2027 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 MACROD2A1Z1Q3 448 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 LCHNA4D1U4 455 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 CARNS1A5YM72 827 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 ANKRD62A6NC57 917 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 H7C4K7 107 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 O00370 1275 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 MSTNO14793 375 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 ZNF500O60304 480 aaPredicted RBP7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 ATP2C2O75185 946 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 MICAL2O94851 1124 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 IL2RAP01589 272 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 CYP1A1P04798 512 aaPredicted RBP7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 CYP11A1P05108 521 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 CCDC130P13994 396 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 TKTP29401 623 aaKnown RBP7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 CDR1P51861 262 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 ARPP19P56211 112 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 SNX16P57768 344 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 GNG11P61952 73 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 GPC5P78333 572 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 SMAD3P84022 425 aaKnown RBP7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 KRT17Q04695 432 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 MAPRE1Q15691 268 aaKnown RBP7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 RAB30Q15771 203 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 IFI16Q16666 785 aaKnown RBP7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 USP41Q3LFD5 358 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 LRIT3Q3SXY7 679 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 CTXN3Q4LDR2 81 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 MDH1BQ5I0G3 518 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 LIN9Q5TKA1 542 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 FUT10Q6P4F1 479 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 LCLAT1Q6UWP7 414 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 PHLDB2Q86SQ0 1253 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 DNAAF5Q86Y56 855 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 PALB2Q86YC2 1186 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 REXO1L1PQ8IX06 675 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 DCP1BQ8IZD4 617 aaKnown RBP7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 C1orf131Q8NDD1 294 aaKnown RBP7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 SLC2A14Q8TDB8 520 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 ZNF653Q96CK0 615 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 ZNF689Q96CS4 500 aaPredicted RBP7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 IGSF21Q96ID5 467 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 B3GALT6Q96L58 329 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 LPIN3Q9BQK8 851 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 ZSWIM1Q9BR11 485 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 ACBD6Q9BR61 282 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 TTPALQ9BTX7 342 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 PACSIN1Q9BY11 444 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 PBX4Q9BYU1 374 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 GPR62Q9BZJ7 368 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 ZNF518BQ9C0D4 1074 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 LACRTQ9GZZ8 138 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 LHX5Q9H2C1 402 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 CWH43Q9H720 699 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 RC3H2Q9HBD1 1191 aaKnown RBP7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 ST7Q9NRC1 585 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 RAB6BQ9NRW1 208 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 KCND1Q9NSA2 647 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 MARCH5Q9NX47 278 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 TAS2R14Q9NYV8 317 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 ADAM22Q9P0K1 906 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 CTTNBP2NLQ9P2B4 639 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 MYO1AQ9UBC5 1043 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 GTF3C4Q9UKN8 822 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 TSPAN16Q9UKR8 245 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 INTUQ9ULD6 942 aa7.02□□□□□ -1.29
CLTCL1-206ENST00000540896 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms