RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 RBBP8NLQ8NC74 664 aaPredicted RBP11.22□□□□□ -0.61
ATL3-204ENST00000540699 B3GALNT2Q8NCR0 500 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 SLC7A14Q8TBB6 771 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 MYCBPAPQ8TBZ2 947 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 WHAMMQ8TF30 809 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 FUBP3Q96I24 572 aaKnown RBP eCLIP11.22□□□□□ -0.61
ATL3-204ENST00000540699 PCDHB18PQ96TA0 734 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 PACSIN1Q9BY11 444 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 IRX2Q9BZI1 471 aaPredicted RBP11.22□□□□□ -0.61
ATL3-204ENST00000540699 PRKD2Q9BZL6 878 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 CISHQ9NSE2 258 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 MYO1AQ9UBC5 1043 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 HMGXB4Q9UGU5 601 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 GTF3C4Q9UKN8 822 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 INTUQ9ULD6 942 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 PCDHB4Q9Y5E5 795 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 INSL5Q9Y5Q6 135 aa11.22□□□□□ -0.61
ATL3-204ENST00000540699 ANAPC1Q9H1A4 1944 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 A8MXQ7 604 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 PRRG1O14668 218 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 MMEP08473 750 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 PDGFRBP09619 1106 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 HAPLN1P10915 354 aaPredicted RBP11.21□□□□□ -0.61
ATL3-204ENST00000540699 PTPN1P18031 435 aaKnown RBP11.21□□□□□ -0.61
ATL3-204ENST00000540699 TNFAIP3P21580 790 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 ELF1P32519 619 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 MAGEA11P43364 429 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 BPIFB4P59827 614 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 PSMC1P62191 440 aaKnown RBP11.21□□□□□ -0.61
ATL3-204ENST00000540699 NHLH1Q02575 133 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 KIF5AQ12840 1032 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 DUSP4Q13115 394 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 CCDC142Q17RM4 750 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 PPM1LQ5SGD2 360 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 CCDC122Q5T0U0 273 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 RARS2Q5T160 578 aaKnown RBP11.21□□□□□ -0.61
ATL3-204ENST00000540699 TMEM270Q6UE05 265 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 SYT10Q6XYQ8 523 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 C4orf50Q6ZRC1 276 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 ZNF677Q86XU0 584 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 TXLNBQ8N3L3 684 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 TTC9BQ8N6N2 239 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 FEZF2Q8TBJ5 459 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 TNIP3Q96KP6 325 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 PGLYRP2Q96PD5 576 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 TWNKQ96RR1 684 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 WDR24Q96S15 920 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 ELOVL4Q9GZR5 314 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 ISCUQ9H1K1 167 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 DPEP3Q9H4B8 488 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 CYP4F11Q9HBI6 524 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 LUC7LQ9NQ29 371 aaKnown RBP11.21□□□□□ -0.61
ATL3-204ENST00000540699 TAS2R14Q9NYV8 317 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 SALL4Q9UJQ4 1053 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 GUCA1BQ9UMX6 200 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 USP15Q9Y4E8 981 aaPredicted RBP11.21□□□□□ -0.61
ATL3-204ENST00000540699 YIPF1Q9Y548 306 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 PCDHB5Q9Y5E4 795 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 DUSP10Q9Y6W6 482 aa11.21□□□□□ -0.61
ATL3-204ENST00000540699 NCANO14594 1321 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 CCDC195A0A1B0GUA6 201 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 KIF5CO60282 957 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 CLSTN1O94985 981 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 CALCAP01258 141 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 H2AFZP0C0S5 128 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 GZMAP12544 262 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 GNA15P30679 374 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 MTHFRP42898 656 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 TUFMP49411 452 aaKnown RBP11.2□□□□□ -0.62
ATL3-204ENST00000540699 YWHAEP62258 255 aaKnown RBP11.2□□□□□ -0.62
ATL3-204ENST00000540699 PLD1Q13393 1074 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 TAF3Q5VWG9 929 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 CES5AQ6NT32 575 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 VSTM1Q6UX27 236 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 TMC5Q6UXY8 1006 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 H2AFVQ71UI9 128 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 DNAAF5Q86Y56 855 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 SLC4A11Q8NBS3 891 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 MYLPFQ96A32 169 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 PCED1BQ96HM7 432 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 CEP295NLQ96MC4 621 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 NECTIN4Q96NY8 510 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 ZSWIM1Q9BR11 485 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 NT5C1AQ9BXI3 368 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 AVENQ9NQS1 362 aaPredicted RBP11.2□□□□□ -0.62
ATL3-204ENST00000540699 ZDBF2Q9HCK1 2354 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 USP34Q70CQ2 3546 aa11.2□□□□□ -0.62
ATL3-204ENST00000540699 A0A0A6YYK5 440 aaPredicted RBP11.19□□□□□ -0.62
ATL3-204ENST00000540699 XYLBO75191 536 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 CYP1A1P04798 512 aaPredicted RBP11.19□□□□□ -0.62
ATL3-204ENST00000540699 TMEM253P0C7T8 217 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 UNGP13051 313 aaPredicted RBP11.19□□□□□ -0.62
ATL3-204ENST00000540699 ATF6P18850 670 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 CD58P19256 250 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 RAD23BP54727 409 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 EPHA5P54756 1037 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 GALCP54803 685 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 GNG11P61952 73 aa11.19□□□□□ -0.62
ATL3-204ENST00000540699 CBX2Q14781 532 aaPredicted RBP11.19□□□□□ -0.62
ATL3-204ENST00000540699 CLEC16AQ2KHT3 1053 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms