RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 NEUROD6Q96NK8 337 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 RBM15Q96T37 977 aaKnown RBP eCLIP9.85□□□□□ -0.83
CLIP1-214ENST00000540539 FERMT1Q9BQL6 677 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.85□□□□□ -0.83
CLIP1-214ENST00000540539 Q9H521 79 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 C17orf75Q9HAS0 396 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 NEK6Q9HC98 313 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 FAM217BQ9NTX9 383 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-214ENST00000540539 ADAMTS1Q9UHI8 967 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 LGALS13Q9UHV8 139 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 PCDHA12Q9UN75 941 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 INPP5FQ9Y2H2 1132 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 RWDD3Q9Y3V2 267 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 ANGPTL3Q9Y5C1 460 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 ZMYM2Q9UBW7 1377 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 POTECB2RU33 542 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 B8ZZF3 427 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 CASQ2O14958 399 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-214ENST00000540539 ZC3H11AO75152 810 aaKnown RBP eCLIP9.85□□□□□ -0.83
CLIP1-214ENST00000540539 GMNNO75496 209 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 RFX5P48382 616 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-214ENST00000540539 GNG2P59768 71 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 ZNF200P98182 395 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-214ENST00000540539 ZBTB16Q05516 673 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 OVGP1Q12889 678 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 ITGADQ13349 1161 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 KLHL38Q2WGJ6 581 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 SLFN13Q68D06 897 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 ANKRD40Q6AI12 368 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 TRIML2Q8N7C3 387 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 TPCN2Q8NHX9 752 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 NCOA7Q8NI08 942 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 DCUN1D1Q96GG9 259 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 ZNF486Q96H40 463 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-214ENST00000540539 HOXD1Q9GZZ0 328 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 TNRC6CQ9HCJ0 1690 aaKnown RBP9.85□□□□□ -0.83
CLIP1-214ENST00000540539 ARMCX1Q9P291 453 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 PARP2Q9UGN5 583 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 AP4B1Q9Y6B7 739 aa9.85□□□□□ -0.83
CLIP1-214ENST00000540539 ARPC4-TTLL3A0A0A6YYG9 625 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 PVALEFA0A1B0GWK0 134 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 ILVBLA1L0T0 632 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 CFAP99D6REC4 459 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 KPNA4O00629 521 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-214ENST00000540539 HOXC11O43248 304 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-214ENST00000540539 KLHL41O60662 606 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 CFL1P23528 166 aaKnown RBP9.84□□□□□ -0.83
CLIP1-214ENST00000540539 RPA1P27694 616 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 PTGIRP43119 386 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 GPR141Q7Z602 305 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 NOP9Q86U38 636 aaKnown RBP9.84□□□□□ -0.83
CLIP1-214ENST00000540539 CCDC84Q86UT8 332 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-214ENST00000540539 DNAAF5Q86Y56 855 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 ANKRD35Q8N283 1001 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 SLC26A7Q8TE54 656 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 C12orf43Q96C57 262 aaKnown RBP9.84□□□□□ -0.83
CLIP1-214ENST00000540539 C18orf8Q96DM3 657 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 ASIC4Q96FT7 647 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 ZNF512Q96ME7 567 aaPredicted RBP9.84□□□□□ -0.83
CLIP1-214ENST00000540539 SLC29A1Q99808 456 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 MYL10Q9BUA6 226 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 MOCS1Q9NZB8 636 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 ANKFY1Q9P2R3 1169 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 ANKMY1Q9P2S6 941 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 BCAP29Q9UHQ4 241 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 DAPK2Q9UIK4 370 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 NAALADL1Q9UQQ1 740 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 PCDHA3Q9Y5H8 950 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 ACTL7BQ9Y614 415 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 TAF1P21675 1872 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 RIC1Q4ADV7 1423 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 A0A1W2PRG0 241 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 ANKRD63C9JTQ0 380 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 XPO1O14980 1071 aaKnown RBP9.84□□□□□ -0.83
CLIP1-214ENST00000540539 FOXP2O15409 715 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 ARHGEF15O94989 841 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 POLR2MP0CAP2 368 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 ATP6V0D1P61421 351 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 MRPS9P82933 396 aaKnown RBP9.84□□□□□ -0.83
CLIP1-214ENST00000540539 PTPN12Q05209 780 aaKnown RBP9.84□□□□□ -0.83
CLIP1-214ENST00000540539 SSRP1Q08945 709 aaKnown RBP9.84□□□□□ -0.83
CLIP1-214ENST00000540539 PTK2BQ14289 1009 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 PDK1Q15118 436 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 ZYXQ15942 572 aaKnown RBP9.84□□□□□ -0.83
CLIP1-214ENST00000540539 DCAF12L1Q5VU92 463 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 AGAP7PQ5VUJ5 663 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 LLGL2Q6P1M3 1020 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 KYAT3Q6YP21 454 aaKnown RBP9.84□□□□□ -0.83
CLIP1-214ENST00000540539 SLC15A4Q8N697 577 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 TSPAN14Q8NG11 270 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 P2RX5Q93086 422 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 RMDN1Q96DB5 314 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 C1orf74Q96LT6 269 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 IER2Q9BTL4 223 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 MXD3Q9BW11 206 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 MROQ9BYG7 248 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 TMEM206Q9H813 350 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 COPRSQ9NQ92 184 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 AAASQ9NRG9 546 aa9.84□□□□□ -0.83
CLIP1-214ENST00000540539 ARPP21Q9UBL0 812 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms