RNA–Protein interactions for RNA: ENST00000540269.6

USP10-202, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 1 (best)

Gene USP10, Length 3,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-202ENST00000540269 DENND1AQ8TEH3 1009 aa12.97□□□□□ -0.33
USP10-202ENST00000540269 BRI3BPQ8WY22 251 aa12.97□□□□□ -0.33
USP10-202ENST00000540269 LENG1Q96BZ8 264 aaPredicted RBP12.97□□□□□ -0.33
USP10-202ENST00000540269 TGS1Q96RS0 853 aaKnown RBP12.97□□□□□ -0.33
USP10-202ENST00000540269 C12orf65Q9H3J6 166 aaKnown RBP12.97□□□□□ -0.33
USP10-202ENST00000540269 GBA2Q9HCG7 927 aaPredicted RBP12.97□□□□□ -0.33
USP10-202ENST00000540269 VTA1Q9NP79 307 aa12.97□□□□□ -0.33
USP10-202ENST00000540269 RABGEF1Q9UJ41 708 aa12.97□□□□□ -0.33
USP10-202ENST00000540269 EFR3BQ9Y2G0 817 aa12.97□□□□□ -0.33
USP10-202ENST00000540269 ATP5DP30049 168 aa12.96□□□□□ -0.33
USP10-202ENST00000540269 RBP5P82980 135 aa12.96□□□□□ -0.33
USP10-202ENST00000540269 DPYSL3Q14195 570 aa12.96□□□□□ -0.33
USP10-202ENST00000540269 HIF1AQ16665 826 aa12.96□□□□□ -0.33
USP10-202ENST00000540269 CCDC14Q49A88 953 aa12.96□□□□□ -0.33
USP10-202ENST00000540269 FAM47EQ6ZV65 393 aa12.96□□□□□ -0.33
USP10-202ENST00000540269 AGGF1Q8N302 714 aaeCLIP12.96□□□□□ -0.33
USP10-202ENST00000540269 SPATA18Q8TC71 538 aa12.96□□□□□ -0.33
USP10-202ENST00000540269 THOC1Q96FV9 657 aaKnown RBP12.96□□□□□ -0.33
USP10-202ENST00000540269 MAK16Q9BXY0 300 aaKnown RBP12.96□□□□□ -0.33
USP10-202ENST00000540269 DPEP3Q9H4B8 488 aa12.96□□□□□ -0.33
USP10-202ENST00000540269 TRABDQ9H4I3 376 aa12.96□□□□□ -0.33
USP10-202ENST00000540269 C2CD2Q9Y426 696 aa12.96□□□□□ -0.33
USP10-202ENST00000540269 SNX9Q9Y5X1 595 aa12.96□□□□□ -0.33
USP10-202ENST00000540269 APOC4-APOC2K7ER74 178 aa12.96□□□□□ -0.34
USP10-202ENST00000540269 HGSO14964 777 aaPredicted RBP12.96□□□□□ -0.34
USP10-202ENST00000540269 APOC2P02655 101 aa12.96□□□□□ -0.34
USP10-202ENST00000540269 MMP3P08254 477 aa12.96□□□□□ -0.34
USP10-202ENST00000540269 GPD1P21695 349 aa12.96□□□□□ -0.34
USP10-202ENST00000540269 STX2P32856 288 aa12.96□□□□□ -0.34
USP10-202ENST00000540269 GCLCP48506 637 aaPredicted RBP12.96□□□□□ -0.34
USP10-202ENST00000540269 ATXN1P54253 815 aaKnown RBP12.96□□□□□ -0.34
USP10-202ENST00000540269 PKDCCQ504Y2 493 aa12.96□□□□□ -0.34
USP10-202ENST00000540269 PRAMEF19Q5SWL8 479 aa12.96□□□□□ -0.34
USP10-202ENST00000540269 C1orf228Q6PIY5 440 aa12.96□□□□□ -0.34
USP10-202ENST00000540269 CENPUQ71F23 418 aa12.96□□□□□ -0.34
USP10-202ENST00000540269 TRPM8Q7Z2W7 1104 aa12.96□□□□□ -0.34
USP10-202ENST00000540269 SCUBE3Q8IX30 993 aa12.96□□□□□ -0.34
USP10-202ENST00000540269 CLEC4CQ8WTT0 213 aa12.96□□□□□ -0.34
USP10-202ENST00000540269 EMID1Q96A84 441 aaPredicted RBP12.96□□□□□ -0.34
USP10-202ENST00000540269 L3MBTL3Q96JM7 780 aaPredicted RBP12.96□□□□□ -0.34
USP10-202ENST00000540269 RMDN2Q96LZ7 410 aa12.96□□□□□ -0.34
USP10-202ENST00000540269 CCDC77Q9BR77 488 aa12.96□□□□□ -0.34
USP10-202ENST00000540269 ACTR5Q9H9F9 607 aaPredicted RBP12.96□□□□□ -0.34
USP10-202ENST00000540269 GEMIN8Q9NWZ8 242 aaKnown RBP12.96□□□□□ -0.34
USP10-202ENST00000540269 ITGA11Q9UKX5 1188 aa12.96□□□□□ -0.34
USP10-202ENST00000540269 ZMYND8Q9ULU4 1186 aaPredicted RBP12.96□□□□□ -0.34
USP10-202ENST00000540269 UBOX5O94941 541 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 ASMTLO95671 621 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 SLC1A5Q15758 541 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 PPIL6Q8IXY8 311 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 NPLOC4Q8TAT6 608 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 RSAD2Q8WXG1 361 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 PAIP2Q9BPZ3 127 aaKnown RBP12.95□□□□□ -0.34
USP10-202ENST00000540269 SYT17Q9BSW7 474 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 NT5C1AQ9BXI3 368 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 ADAMTS10Q9H324 1103 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 SLC12A4Q9UP95 1085 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 USP15Q9Y4E8 981 aaPredicted RBP12.95□□□□□ -0.34
USP10-202ENST00000540269 RNF8O76064 485 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 RPA3P35244 121 aaPredicted RBP12.95□□□□□ -0.34
USP10-202ENST00000540269 OLFML1Q6UWY5 402 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 TDRPQ86YL5 185 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 FUKQ8N0W3 1084 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 CCDC33Q8N5R6 958 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 FBXO36Q8NEA4 188 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 ZC3H15Q8WU90 426 aaKnown RBP12.95□□□□□ -0.34
USP10-202ENST00000540269 CNPY3Q9BT09 278 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 SLCO1B3Q9NPD5 702 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 PNMA3Q9UL41 463 aa12.95□□□□□ -0.34
USP10-202ENST00000540269 CCL15-CCL14A0A0B4J2E2 113 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 FAM47DPA6NHR8 397 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 PAPSS1O43252 624 aaPredicted RBP12.94□□□□□ -0.34
USP10-202ENST00000540269 AVILO75366 819 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 GHRP10912 638 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 GRM5P41594 1212 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 CCL15Q16663 113 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 BBS9Q3SYG4 887 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 EFHC2Q5JST6 749 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 ZNF618Q5T7W0 954 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 GPR142Q7Z601 462 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 PQLC3Q8N755 202 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 MAML3Q96JK9 1138 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 TTC25Q96NG3 672 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 OSMRQ99650 979 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 NXF3Q9H4D5 531 aaKnown RBP12.94□□□□□ -0.34
USP10-202ENST00000540269 ASNSD1Q9NWL6 643 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 PRKAG3Q9UGI9 489 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 ACTL7BQ9Y614 415 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 KAT6AQ92794 2004 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 COL1A2P08123 1366 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 KRT15P19012 456 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 PCK1P35558 622 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 BASP1P80723 227 aaKnown RBP12.94□□□□□ -0.34
USP10-202ENST00000540269 NOMO1Q15155 1222 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 SCYL2Q6P3W7 929 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 ANKS4BQ8N8V4 417 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 FBF1Q8TES7 1133 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 FAXDC2Q96IV6 333 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 MAGEB18Q96M61 343 aa12.94□□□□□ -0.34
USP10-202ENST00000540269 KLF6Q99612 283 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms