RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 UBE3CQ15386 1083 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 ABCB5Q2M3G0 1257 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 SDCCAG3Q96C92 435 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 UPF3AQ9H1J1 476 aaKnown RBP11.5□□□□□ -0.57
PBX1-212ENST00000540236 NADKO95544 446 aaPredicted RBP11.5□□□□□ -0.57
PBX1-212ENST00000540236 GSSP48637 474 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 MFAP3P55082 362 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 FSTL1Q12841 308 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 PLCL1Q15111 1095 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 PKN1Q16512 942 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 POC5Q8NA72 575 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 C1orf131Q8NDD1 294 aaKnown RBP11.5□□□□□ -0.57
PBX1-212ENST00000540236 LNX1Q8TBB1 728 aaPredicted RBP11.5□□□□□ -0.57
PBX1-212ENST00000540236 CABLES1Q8TDN4 633 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 PMEPA1Q969W9 287 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 SOX13Q9UN79 622 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 ABCC6O95255 1503 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 SNTNA6NMZ2 147 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 TLR2O60603 784 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 CGB2Q6NT52 195 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 C16orf89Q6UX73 402 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 PRELID2Q8N945 189 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 PPP1R10Q96QC0 940 aaKnown RBP11.5□□□□□ -0.57
PBX1-212ENST00000540236 SH2D3AQ9BRG2 576 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 WHRNQ9P202 907 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 FUOMA2VDF0 154 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 YARSP54577 528 aaKnown RBP11.5□□□□□ -0.57
PBX1-212ENST00000540236 FAAP100Q0VG06 881 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 GUF1Q8N442 669 aaKnown RBP11.5□□□□□ -0.57
PBX1-212ENST00000540236 CMTM5Q96DZ9 223 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 SLC52A2Q9HAB3 445 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 TMLHEQ9NVH6 421 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 SAE1Q9UBE0 346 aaPredicted RBP11.5□□□□□ -0.57
PBX1-212ENST00000540236 ITGB1BP2Q9UKP3 347 aa11.5□□□□□ -0.57
PBX1-212ENST00000540236 FAM86B1E9PN63 330 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 PHGDHO43175 533 aaKnown RBP11.49□□□□□ -0.57
PBX1-212ENST00000540236 KRT37O76014 449 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 KCNH1O95259 989 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 RELAQ04206 551 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 PDK4Q16654 411 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 KNOP1Q1ED39 458 aaKnown RBP11.49□□□□□ -0.57
PBX1-212ENST00000540236 DCAF12L1Q5VU92 463 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 SGMS1Q86VZ5 419 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 IFNL2Q8IZJ0 200 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 PCDH20Q8N6Y1 951 aaKnown RBP11.49□□□□□ -0.57
PBX1-212ENST00000540236 HDAC11Q96DB2 347 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 ARHGEF35A5YM69 484 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 SIN3BO75182 1162 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 CD19P15391 556 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 VARSP26640 1264 aaKnown RBP11.49□□□□□ -0.57
PBX1-212ENST00000540236 AVPR1AP37288 418 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 ZDHHC24Q6UX98 284 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 OSCP1Q8WVF1 389 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 CDHR1Q96JP9 859 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 PTPRHQ9HD43 1115 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 UCKL1Q9NWZ5 548 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 TAS2R1Q9NYW7 299 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 ADGRA3Q8IWK6 1321 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 PTGES3LE9PB15 166 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 DDX3YO15523 660 aaKnown RBP11.49□□□□□ -0.57
PBX1-212ENST00000540236 MT-CO1P00395 513 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 TMEM253P0C7T8 217 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 ITGA9Q13797 1035 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 TBC1D9BQ66K14 1250 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 BNC2Q6ZN30 1099 aaPredicted RBP11.49□□□□□ -0.57
PBX1-212ENST00000540236 RNF135Q8IUD6 432 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 NDUFAF2Q8N183 169 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 FAM172AQ8WUF8 416 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 AGAP3Q96P47 875 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 RERGLQ9H628 205 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 TMOD3Q9NYL9 352 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 A0A1W2PQ72 361 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 LDHBP07195 334 aaKnown RBP11.49□□□□□ -0.57
PBX1-212ENST00000540236 WDR4P57081 412 aaKnown RBP11.49□□□□□ -0.57
PBX1-212ENST00000540236 GRB10Q13322 594 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 CLEC4FQ8N1N0 589 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 FAM71DQ8N9W8 422 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 SLC10A4Q96EP9 437 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 MMP19Q99542 508 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 AGXT2Q9BYV1 514 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 ADAM7Q9H2U9 754 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 GPRC5DQ9NZD1 345 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 AKR1D1P51857 326 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 OCRLQ01968 901 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 SCARA5Q6ZMJ2 495 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 OFCC1Q8IZS5 231 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 SLC44A5Q8NCS7 719 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 CCSER2Q9H7U1 834 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 EMSYQ7Z589 1322 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 KDM3AQ9Y4C1 1321 aa11.49□□□□□ -0.57
PBX1-212ENST00000540236 GGPS1O95749 300 aa11.48□□□□□ -0.57
PBX1-212ENST00000540236 FYNP06241 537 aa11.48□□□□□ -0.57
PBX1-212ENST00000540236 HGSNATQ68CP4 663 aa11.48□□□□□ -0.57
PBX1-212ENST00000540236 FAM47BQ8NA70 645 aa11.48□□□□□ -0.57
PBX1-212ENST00000540236 ALG3Q92685 438 aa11.48□□□□□ -0.57
PBX1-212ENST00000540236 ARHGEF1Q92888 912 aaKnown RBP11.48□□□□□ -0.57
PBX1-212ENST00000540236 PLEKHA8Q96JA3 519 aa11.48□□□□□ -0.57
PBX1-212ENST00000540236 FADS3Q9Y5Q0 445 aa11.48□□□□□ -0.57
PBX1-212ENST00000540236 PDLIM1O00151 329 aa11.48□□□□□ -0.57
PBX1-212ENST00000540236 KLHL2O95198 593 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms