RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 NELL1Q92832 810 aa20.58■□□□□ 0.89
RAP1B-221ENST00000540209 MED10Q9BTT4 135 aa20.58■□□□□ 0.89
RAP1B-221ENST00000540209 NIF3L1Q9GZT8 377 aa20.58■□□□□ 0.89
RAP1B-221ENST00000540209 MMRN2Q9H8L6 949 aa20.58■□□□□ 0.89
RAP1B-221ENST00000540209 DMAP1Q9NPF5 467 aaPredicted RBP20.58■□□□□ 0.89
RAP1B-221ENST00000540209 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.58■□□□□ 0.891e-7■■■■■ 50.6
RAP1B-221ENST00000540209 CIZ1Q9ULV3 898 aaPredicted RBP20.58■□□□□ 0.89
RAP1B-221ENST00000540209 GVINP1Q7Z2Y8 2422 aa20.57■□□□□ 0.88
RAP1B-221ENST00000540209 RTN3O95197 1032 aaPredicted RBP20.57■□□□□ 0.88
RAP1B-221ENST00000540209 CCDC130P13994 396 aa20.57■□□□□ 0.88
RAP1B-221ENST00000540209 ARSAP15289 507 aa20.57■□□□□ 0.88
RAP1B-221ENST00000540209 ZXDBP98169 803 aa20.57■□□□□ 0.88
RAP1B-221ENST00000540209 CCINQ13939 588 aa20.57■□□□□ 0.88
RAP1B-221ENST00000540209 PDGFRLQ15198 375 aa20.57■□□□□ 0.88
RAP1B-221ENST00000540209 ANKRD40Q6AI12 368 aa20.57■□□□□ 0.88
RAP1B-221ENST00000540209 SLC2A14Q8TDB8 520 aa20.57■□□□□ 0.88
RAP1B-221ENST00000540209 SH3RF2Q8TEC5 729 aa20.57■□□□□ 0.88
RAP1B-221ENST00000540209 OSCP1Q8WVF1 389 aa20.57■□□□□ 0.88
RAP1B-221ENST00000540209 SLITRK1Q96PX8 696 aa20.57■□□□□ 0.88
RAP1B-221ENST00000540209 TWNKQ96RR1 684 aa20.57■□□□□ 0.88
RAP1B-221ENST00000540209 TSG101Q99816 390 aa20.57■□□□□ 0.88
RAP1B-221ENST00000540209 CYP3A43Q9HB55 503 aa20.57■□□□□ 0.88
RAP1B-221ENST00000540209 CSNK1G1Q9HCP0 422 aa20.57■□□□□ 0.88
RAP1B-221ENST00000540209 KRT82Q9NSB4 513 aa20.57■□□□□ 0.88
RAP1B-221ENST00000540209 RBM12Q9NTZ6 932 aaKnown RBP20.57■□□□□ 0.88
RAP1B-221ENST00000540209 TRIM49BA6NDI0 452 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 SLC16A3O15427 465 aaKnown RBP20.56■□□□□ 0.88
RAP1B-221ENST00000540209 AP1G2O75843 785 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 OAS1P00973 400 aaKnown RBP20.56■□□□□ 0.88
RAP1B-221ENST00000540209 TDGF1P13385 188 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 MXI1P50539 228 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 SLC5A3P53794 718 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 FKBP3Q00688 224 aaKnown RBP20.56■□□□□ 0.88
RAP1B-221ENST00000540209 LRRC63Q05C16 580 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 DGKKQ5KSL6 1271 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 TSSK4Q6SA08 328 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 C12orf29Q8N999 325 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 ZBTB44Q8NCP5 570 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 ZMIZ2Q8NF64 920 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 OVCA2Q8WZ82 227 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 SEMA4DQ92854 862 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 SMOQ99835 787 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 RNF38Q9H0F5 515 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 IL37Q9NZH6 218 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 PCDHGA2Q9Y5H1 932 aa20.56■□□□□ 0.88
RAP1B-221ENST00000540209 KIAA1549LQ6ZVL6 1849 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 FAM92AA1XBS5 289 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 STX10O60499 249 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 KINO60870 393 aaKnown RBP20.55■□□□□ 0.88
RAP1B-221ENST00000540209 GADD45BO75293 160 aaPredicted RBP20.55■□□□□ 0.88
RAP1B-221ENST00000540209 BEST1O76090 585 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 LMNAP02545 664 aaKnown RBP20.55■□□□□ 0.88
RAP1B-221ENST00000540209 YWHAQP27348 245 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 CCR3P51677 355 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 SLC7A9P82251 487 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 IFRD2Q12894 506 aaPredicted RBP20.55■□□□□ 0.88
RAP1B-221ENST00000540209 EML3Q32P44 896 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 Q6ZS52 159 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 SPEM1Q8N4L4 309 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 CCDC150Q8NCX0 1101 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 FBXL13Q8NEE6 735 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 PDZD8Q8NEN9 1154 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 SCAMP5Q8TAC9 235 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 WHAMMQ8TF30 809 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 FAXDC2Q96IV6 333 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 FAM49BQ9NUQ9 324 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 DUS2Q9NX74 493 aaKnown RBP20.55■□□□□ 0.88
RAP1B-221ENST00000540209 WNT6Q9Y6F9 365 aa20.55■□□□□ 0.88
RAP1B-221ENST00000540209 TRDMT1O14717 391 aaKnown RBP20.54■□□□□ 0.88
RAP1B-221ENST00000540209 CILPO75339 1184 aa20.54■□□□□ 0.88
RAP1B-221ENST00000540209 TMEM196Q5HYL7 178 aa20.54■□□□□ 0.88
RAP1B-221ENST00000540209 SNX30Q5VWJ9 437 aa20.54■□□□□ 0.88
RAP1B-221ENST00000540209 SYNPOQ8N3V7 929 aa20.54■□□□□ 0.88
RAP1B-221ENST00000540209 CPA6Q8N4T0 437 aa20.54■□□□□ 0.88
RAP1B-221ENST00000540209 TTC16Q8NEE8 873 aa20.54■□□□□ 0.88
RAP1B-221ENST00000540209 ATP2A3Q93084 1043 aa20.54■□□□□ 0.88
RAP1B-221ENST00000540209 FBXO32Q969P5 355 aa20.54■□□□□ 0.88
RAP1B-221ENST00000540209 HNRNPABQ99729 332 aaKnown RBP20.54■□□□□ 0.88
RAP1B-221ENST00000540209 NT5C1AQ9BXI3 368 aa20.54■□□□□ 0.88
RAP1B-221ENST00000540209 FAM126AQ9BYI3 521 aaPredicted RBP20.54■□□□□ 0.88
RAP1B-221ENST00000540209 ECT2Q9H8V3 914 aa20.54■□□□□ 0.88
RAP1B-221ENST00000540209 COMMD8Q9NX08 183 aa20.54■□□□□ 0.88
RAP1B-221ENST00000540209 RAB20Q9NX57 234 aa20.54■□□□□ 0.88
RAP1B-221ENST00000540209 ZSCAN32Q9NX65 697 aa20.54■□□□□ 0.88
RAP1B-221ENST00000540209 MAN1B1Q9UKM7 699 aa20.54■□□□□ 0.88
RAP1B-221ENST00000540209 OTOGLQ3ZCN5 2332 aa20.54■□□□□ 0.88
RAP1B-221ENST00000540209 DCHS1Q96JQ0 3298 aa20.53■□□□□ 0.88
RAP1B-221ENST00000540209 LEFTY2O00292 366 aa20.53■□□□□ 0.88
RAP1B-221ENST00000540209 PSMA7O14818 248 aa20.53■□□□□ 0.88
RAP1B-221ENST00000540209 LILRB5O75023 590 aa20.53■□□□□ 0.88
RAP1B-221ENST00000540209 ABL1P00519 1130 aa20.53■□□□□ 0.88
RAP1B-221ENST00000540209 CD44P16070 742 aaKnown RBP20.53■□□□□ 0.88
RAP1B-221ENST00000540209 CD58P19256 250 aa20.53■□□□□ 0.88
RAP1B-221ENST00000540209 TRIM21P19474 475 aaKnown RBP20.53■□□□□ 0.88
RAP1B-221ENST00000540209 GJA4P35212 333 aa20.53■□□□□ 0.88
RAP1B-221ENST00000540209 IFNAR2P48551 515 aa20.53■□□□□ 0.88
RAP1B-221ENST00000540209 FOXK2Q01167 660 aa20.53■□□□□ 0.88
RAP1B-221ENST00000540209 SATB1Q01826 763 aa20.53■□□□□ 0.88
RAP1B-221ENST00000540209 STIM1Q13586 685 aa20.53■□□□□ 0.88
RAP1B-221ENST00000540209 PPP2R5DQ14738 602 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms