RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 HEXIM2Q96MH2 286 aaKnown RBP7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 NAP1L5Q96NT1 182 aaPredicted RBP7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 KCNK16Q96T55 309 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 ZSWIM1Q9BR11 485 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 TTLL2Q9BWV7 592 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 IL21Q9HBE4 155 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 PNPLA8Q9NP80 782 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 FAM207AQ9NSI2 230 aaPredicted RBP7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 TSPAN16Q9UKR8 245 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 USTQ9Y2C2 406 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 NR2E1Q9Y466 385 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 DAAM1Q9Y4D1 1078 aa7.39□□□□□ -1.23
LPCAT3-209ENST00000540060 A0A1W2PQC6 194 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 A0A1W2PRU2 124 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 HHLA1C9JL84 531 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 F8VZ95 297 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 FOXN3O00409 490 aaPredicted RBP7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 MICAL2O94851 1124 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 FGF19O95750 216 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 SERPINC1P01008 464 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 MYL4P12829 197 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 GABRR2P28476 465 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 GNA15P30679 374 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 PBX1P40424 430 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 SLC5A3P53794 718 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 BCAT1P54687 386 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 MAP3K7CLP57077 242 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 POLR2FP61218 127 aaKnown RBP7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 USP46P62068 366 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 BST2Q10589 180 aaKnown RBP7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 DRAP1Q14919 205 aaPredicted RBP7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 STILQ15468 1287 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 MEA1Q16626 185 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 PTPN21Q16825 1174 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 FILIP1LQ4L180 1135 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 PKDCCQ504Y2 493 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 CYP4A22Q5TCH4 519 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 LCLAT1Q6UWP7 414 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 OTOP3Q7RTS5 596 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 GPRIN1Q7Z2K8 1008 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 FAM71AQ8IYT1 594 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 TDRD5Q8NAT2 981 aaKnown RBP7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 ANKRD52Q8NB46 1076 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 RNF214Q8ND24 703 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 NEK11Q8NG66 645 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 ING5Q8WYH8 240 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 FGF13Q92913 245 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 RPGRIP1Q96KN7 1286 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 NECAB3Q96P71 396 aaPredicted RBP7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 MYADMQ96S97 322 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 DUSP16Q9BY84 665 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 ACP6Q9NPH0 428 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 IL37Q9NZH6 218 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 EPS15L1Q9UBC2 864 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 UXTQ9UBK9 157 aaPredicted RBP7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 CDH7Q9ULB5 785 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 KIAA1257Q9ULG3 409 aa7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 MAGED2Q9UNF1 606 aaPredicted RBP7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 MRPS23Q9Y3D9 190 aaKnown RBP7.38□□□□□ -1.23
LPCAT3-209ENST00000540060 NCANO14594 1321 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 KIAA1549LQ6ZVL6 1849 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 FAM92AA1XBS5 289 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 M0QYV0 167 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 TULP2O00295 520 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 ZNF197O14709 1029 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 XPO1O14980 1071 aaKnown RBP7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 CYP26A1O43174 497 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 THAP12O43422 761 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 RTN3O95197 1032 aaPredicted RBP7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 F11P03951 625 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 SETSIPP0DME0 302 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 LAMP2P13473 410 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 GJA1P17302 382 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 CDC25CP30307 473 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 GBP2P32456 591 aaPredicted RBP7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 CLCN1P35523 988 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 USP8P40818 1118 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 PLA2G4AP47712 749 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 UBASH3AP57075 661 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 CYP4F8P98187 520 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 PDE4CQ08493 712 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 NR1I3Q14994 352 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 TEAD2Q15562 447 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 CNGA2Q16280 664 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 TAF12Q16514 161 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 RAB41Q5JT25 222 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 STXBP5Q5T5C0 1151 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 SLC47A2Q86VL8 602 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 ZDHHC14Q8IZN3 488 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 NUP93Q8N1F7 819 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 SCAMP5Q8TAC9 235 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 ACSF2Q96CM8 615 aaPredicted RBP7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 PCMTD1Q96MG8 357 aaPredicted RBP7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 GCNAQ96QF7 691 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 UHRF1Q96T88 793 aaPredicted RBP7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 STK33Q9BYT3 514 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 TTYH3Q9C0H2 523 aa7.37□□□□□ -1.23
LPCAT3-209ENST00000540060 CD320Q9NPF0 282 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms